Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb2Q91Y00 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb2Q91Y00 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Pcdhb2Q91Y00 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb2Q91Y00 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb2Q91Y00 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb2Q91Y00 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb2Q91Y00 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.57■■□□□ 1.04
Pcdhb2Q91Y00 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.57■■□□□ 1.04
Pcdhb2Q91Y00 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Pcdhb2Q91Y00 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb2Q91Y00 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Pcdhb2Q91Y00 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb2Q91Y00 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Pcdhb2Q91Y00 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb2Q91Y00 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb2Q91Y00 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.56■■□□□ 1.04
Pcdhb2Q91Y00 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.56■■□□□ 1.04
Pcdhb2Q91Y00 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb2Q91Y00 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb2Q91Y00 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb2Q91Y00 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb2Q91Y00 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhb2Q91Y00 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb2Q91Y00 Gm21956-201ENSMUST00000179946 522 ntBASIC21.55■■□□□ 1.04
Pcdhb2Q91Y00 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.55■■□□□ 1.04
Pcdhb2Q91Y00 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhb2Q91Y00 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb2Q91Y00 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.55■■□□□ 1.04
Pcdhb2Q91Y00 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb2Q91Y00 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.55■■□□□ 1.04
Pcdhb2Q91Y00 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Pcdhb2Q91Y00 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb2Q91Y00 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb2Q91Y00 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Pcdhb2Q91Y00 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb2Q91Y00 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb2Q91Y00 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Pcdhb2Q91Y00 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb2Q91Y00 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb2Q91Y00 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb2Q91Y00 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb2Q91Y00 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcdhb2Q91Y00 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb2Q91Y00 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Pcdhb2Q91Y00 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhb2Q91Y00 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb2Q91Y00 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb2Q91Y00 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.53■■□□□ 1.04
Pcdhb2Q91Y00 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb2Q91Y00 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb2Q91Y00 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.53■■□□□ 1.04
Pcdhb2Q91Y00 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb2Q91Y00 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb2Q91Y00 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb2Q91Y00 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb2Q91Y00 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb2Q91Y00 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdhb2Q91Y00 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdhb2Q91Y00 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb2Q91Y00 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.51■■□□□ 1.03
Pcdhb2Q91Y00 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb2Q91Y00 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb2Q91Y00 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb2Q91Y00 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb2Q91Y00 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb2Q91Y00 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb2Q91Y00 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb2Q91Y00 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb2Q91Y00 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb2Q91Y00 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb2Q91Y00 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb2Q91Y00 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb2Q91Y00 Gm12821-201ENSMUST00000120022 600 ntBASIC21.49■■□□□ 1.03
Pcdhb2Q91Y00 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb2Q91Y00 Gm43530-201ENSMUST00000195920 274 ntBASIC21.49■■□□□ 1.03
Pcdhb2Q91Y00 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.49■■□□□ 1.03
Pcdhb2Q91Y00 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb2Q91Y00 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb2Q91Y00 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb2Q91Y00 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb2Q91Y00 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb2Q91Y00 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb2Q91Y00 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.48■■□□□ 1.03
Pcdhb2Q91Y00 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb2Q91Y00 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb2Q91Y00 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb2Q91Y00 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb2Q91Y00 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb2Q91Y00 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb2Q91Y00 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb2Q91Y00 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Pcdhb2Q91Y00 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb2Q91Y00 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb2Q91Y00 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb2Q91Y00 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb2Q91Y00 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb2Q91Y00 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.47■■□□□ 1.03
Pcdhb2Q91Y00 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.47■■□□□ 1.03
Pcdhb2Q91Y00 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms