Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Zswim3Q8CFL8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.5■■□□□ 1.19
Zswim3Q8CFL8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.5■■□□□ 1.19
Zswim3Q8CFL8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.5■■□□□ 1.19
Zswim3Q8CFL8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Zswim3Q8CFL8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Zswim3Q8CFL8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Zswim3Q8CFL8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC22.49■■□□□ 1.19
Zswim3Q8CFL8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC22.49■■□□□ 1.19
Zswim3Q8CFL8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Zswim3Q8CFL8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Zswim3Q8CFL8 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.48■■□□□ 1.19
Zswim3Q8CFL8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Zswim3Q8CFL8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Zswim3Q8CFL8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Zswim3Q8CFL8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Zswim3Q8CFL8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Zswim3Q8CFL8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Zswim3Q8CFL8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Zswim3Q8CFL8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Zswim3Q8CFL8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Zswim3Q8CFL8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Zswim3Q8CFL8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Zswim3Q8CFL8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Zswim3Q8CFL8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC22.47■■□□□ 1.19
Zswim3Q8CFL8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.47■■□□□ 1.19
Zswim3Q8CFL8 Gm11421-201ENSMUST00000122124 294 ntBASIC22.47■■□□□ 1.19
Zswim3Q8CFL8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
Zswim3Q8CFL8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC22.47■■□□□ 1.19
Zswim3Q8CFL8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Zswim3Q8CFL8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Zswim3Q8CFL8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Zswim3Q8CFL8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Zswim3Q8CFL8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Zswim3Q8CFL8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Zswim3Q8CFL8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Zswim3Q8CFL8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Zswim3Q8CFL8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC22.46■■□□□ 1.19
Zswim3Q8CFL8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Zswim3Q8CFL8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Zswim3Q8CFL8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Zswim3Q8CFL8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC22.46■■□□□ 1.19
Zswim3Q8CFL8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Zswim3Q8CFL8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Zswim3Q8CFL8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Zswim3Q8CFL8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Zswim3Q8CFL8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Zswim3Q8CFL8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Zswim3Q8CFL8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Zswim3Q8CFL8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
Zswim3Q8CFL8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Zswim3Q8CFL8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.45■■□□□ 1.18
Zswim3Q8CFL8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Zswim3Q8CFL8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Zswim3Q8CFL8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Zswim3Q8CFL8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Zswim3Q8CFL8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Zswim3Q8CFL8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.44■■□□□ 1.18
Zswim3Q8CFL8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Zswim3Q8CFL8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Zswim3Q8CFL8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Zswim3Q8CFL8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Zswim3Q8CFL8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Zswim3Q8CFL8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC22.43■■□□□ 1.18
Zswim3Q8CFL8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC22.43■■□□□ 1.18
Zswim3Q8CFL8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Zswim3Q8CFL8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Zswim3Q8CFL8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Zswim3Q8CFL8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Zswim3Q8CFL8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Zswim3Q8CFL8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.42■■□□□ 1.18
Zswim3Q8CFL8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Zswim3Q8CFL8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Zswim3Q8CFL8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Zswim3Q8CFL8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Zswim3Q8CFL8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Zswim3Q8CFL8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Zswim3Q8CFL8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Zswim3Q8CFL8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Zswim3Q8CFL8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Zswim3Q8CFL8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.41■■□□□ 1.18
Zswim3Q8CFL8 Gm10653-202ENSMUST00000139570 835 ntBASIC22.41■■□□□ 1.18
Zswim3Q8CFL8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Zswim3Q8CFL8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
Zswim3Q8CFL8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Zswim3Q8CFL8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC22.41■■□□□ 1.18
Zswim3Q8CFL8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Zswim3Q8CFL8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Zswim3Q8CFL8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Zswim3Q8CFL8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Zswim3Q8CFL8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Zswim3Q8CFL8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Zswim3Q8CFL8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Zswim3Q8CFL8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Zswim3Q8CFL8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Zswim3Q8CFL8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Zswim3Q8CFL8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC22.4■■□□□ 1.18
Zswim3Q8CFL8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.4■■□□□ 1.18
Zswim3Q8CFL8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Zswim3Q8CFL8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms