Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smim4Q8C1Q6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smim4Q8C1Q6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Smim4Q8C1Q6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smim4Q8C1Q6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Smim4Q8C1Q6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.99■□□□□ 0.31
Smim4Q8C1Q6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Smim4Q8C1Q6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
Smim4Q8C1Q6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smim4Q8C1Q6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smim4Q8C1Q6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Smim4Q8C1Q6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Smim4Q8C1Q6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Smim4Q8C1Q6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smim4Q8C1Q6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smim4Q8C1Q6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Smim4Q8C1Q6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Smim4Q8C1Q6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smim4Q8C1Q6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smim4Q8C1Q6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.98■□□□□ 0.31
Smim4Q8C1Q6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smim4Q8C1Q6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smim4Q8C1Q6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smim4Q8C1Q6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smim4Q8C1Q6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.97■□□□□ 0.31
Smim4Q8C1Q6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.97■□□□□ 0.31
Smim4Q8C1Q6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smim4Q8C1Q6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smim4Q8C1Q6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smim4Q8C1Q6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smim4Q8C1Q6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smim4Q8C1Q6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smim4Q8C1Q6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smim4Q8C1Q6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smim4Q8C1Q6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smim4Q8C1Q6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smim4Q8C1Q6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smim4Q8C1Q6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smim4Q8C1Q6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smim4Q8C1Q6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smim4Q8C1Q6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smim4Q8C1Q6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Smim4Q8C1Q6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Smim4Q8C1Q6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smim4Q8C1Q6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.96■□□□□ 0.31
Smim4Q8C1Q6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smim4Q8C1Q6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smim4Q8C1Q6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smim4Q8C1Q6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smim4Q8C1Q6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smim4Q8C1Q6 Gm43566-201ENSMUST00000196851 808 ntBASIC16.95■□□□□ 0.3
Smim4Q8C1Q6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Smim4Q8C1Q6 Gm5921-201ENSMUST00000075898 882 ntBASIC16.95■□□□□ 0.3
Smim4Q8C1Q6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smim4Q8C1Q6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smim4Q8C1Q6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smim4Q8C1Q6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smim4Q8C1Q6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smim4Q8C1Q6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smim4Q8C1Q6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.95■□□□□ 0.3
Smim4Q8C1Q6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smim4Q8C1Q6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smim4Q8C1Q6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smim4Q8C1Q6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smim4Q8C1Q6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smim4Q8C1Q6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smim4Q8C1Q6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Smim4Q8C1Q6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smim4Q8C1Q6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smim4Q8C1Q6 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.94■□□□□ 0.3
Smim4Q8C1Q6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Smim4Q8C1Q6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Smim4Q8C1Q6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smim4Q8C1Q6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.93■□□□□ 0.3
Smim4Q8C1Q6 Gm10399-202ENSMUST00000202768 748 ntBASIC16.93■□□□□ 0.3
Smim4Q8C1Q6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smim4Q8C1Q6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smim4Q8C1Q6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.93■□□□□ 0.3
Smim4Q8C1Q6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.93■□□□□ 0.3
Smim4Q8C1Q6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Smim4Q8C1Q6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Smim4Q8C1Q6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smim4Q8C1Q6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smim4Q8C1Q6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smim4Q8C1Q6 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.92■□□□□ 0.3
Smim4Q8C1Q6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smim4Q8C1Q6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smim4Q8C1Q6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.92■□□□□ 0.3
Smim4Q8C1Q6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smim4Q8C1Q6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smim4Q8C1Q6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smim4Q8C1Q6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Smim4Q8C1Q6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.92■□□□□ 0.3
Smim4Q8C1Q6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smim4Q8C1Q6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smim4Q8C1Q6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Smim4Q8C1Q6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smim4Q8C1Q6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Smim4Q8C1Q6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.91■□□□□ 0.3
Smim4Q8C1Q6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms