Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Scfd1Q8BRF7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Scfd1Q8BRF7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Scfd1Q8BRF7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scfd1Q8BRF7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scfd1Q8BRF7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Scfd1Q8BRF7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC23.4■■□□□ 1.34
Scfd1Q8BRF7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Scfd1Q8BRF7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.4■■□□□ 1.34
Scfd1Q8BRF7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.4■■□□□ 1.34
Scfd1Q8BRF7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Scfd1Q8BRF7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
Scfd1Q8BRF7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Scfd1Q8BRF7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Scfd1Q8BRF7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Scfd1Q8BRF7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.39■■□□□ 1.33
Scfd1Q8BRF7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Scfd1Q8BRF7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Scfd1Q8BRF7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Scfd1Q8BRF7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Scfd1Q8BRF7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Scfd1Q8BRF7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Scfd1Q8BRF7 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Scfd1Q8BRF7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Scfd1Q8BRF7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
Scfd1Q8BRF7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Scfd1Q8BRF7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Scfd1Q8BRF7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Scfd1Q8BRF7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Scfd1Q8BRF7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Scfd1Q8BRF7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23.37■■□□□ 1.33
Scfd1Q8BRF7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Scfd1Q8BRF7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC23.37■■□□□ 1.33
Scfd1Q8BRF7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Scfd1Q8BRF7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Scfd1Q8BRF7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
Scfd1Q8BRF7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Scfd1Q8BRF7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Scfd1Q8BRF7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Scfd1Q8BRF7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Scfd1Q8BRF7 Gm10209-201ENSMUST00000203397 1607 ntBASIC23.36■■□□□ 1.33
Scfd1Q8BRF7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Scfd1Q8BRF7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Scfd1Q8BRF7 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.35■■□□□ 1.33
Scfd1Q8BRF7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
Scfd1Q8BRF7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Scfd1Q8BRF7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Scfd1Q8BRF7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Scfd1Q8BRF7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Scfd1Q8BRF7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Scfd1Q8BRF7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Scfd1Q8BRF7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Scfd1Q8BRF7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Scfd1Q8BRF7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Scfd1Q8BRF7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Scfd1Q8BRF7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Scfd1Q8BRF7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC23.34■■□□□ 1.33
Scfd1Q8BRF7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Scfd1Q8BRF7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Scfd1Q8BRF7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC23.34■■□□□ 1.33
Scfd1Q8BRF7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Scfd1Q8BRF7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Scfd1Q8BRF7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Scfd1Q8BRF7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Scfd1Q8BRF7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Scfd1Q8BRF7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
Scfd1Q8BRF7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC23.33■■□□□ 1.33
Scfd1Q8BRF7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Scfd1Q8BRF7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC23.33■■□□□ 1.33
Scfd1Q8BRF7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC23.33■■□□□ 1.33
Scfd1Q8BRF7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Scfd1Q8BRF7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Scfd1Q8BRF7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Scfd1Q8BRF7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
Scfd1Q8BRF7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scfd1Q8BRF7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC23.32■■□□□ 1.32
Scfd1Q8BRF7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scfd1Q8BRF7 Gm18284-201ENSMUST00000172604 624 ntBASIC23.32■■□□□ 1.32
Scfd1Q8BRF7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scfd1Q8BRF7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scfd1Q8BRF7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scfd1Q8BRF7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scfd1Q8BRF7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scfd1Q8BRF7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Scfd1Q8BRF7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Scfd1Q8BRF7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Scfd1Q8BRF7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Scfd1Q8BRF7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Scfd1Q8BRF7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.31■■□□□ 1.32
Scfd1Q8BRF7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC23.31■■□□□ 1.32
Scfd1Q8BRF7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Scfd1Q8BRF7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Scfd1Q8BRF7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Scfd1Q8BRF7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Scfd1Q8BRF7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Scfd1Q8BRF7 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Scfd1Q8BRF7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Scfd1Q8BRF7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Scfd1Q8BRF7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
Scfd1Q8BRF7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms