Protein–RNA interactions for Protein: Q6PGE7

Slc6a7, Sodium-dependent proline transporter, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a7Q6PGE7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Slc6a7Q6PGE7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a7Q6PGE7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Slc6a7Q6PGE7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a7Q6PGE7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a7Q6PGE7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a7Q6PGE7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a7Q6PGE7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a7Q6PGE7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc6a7Q6PGE7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a7Q6PGE7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a7Q6PGE7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a7Q6PGE7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a7Q6PGE7 Etf1-202ENSMUST00000180351 108 ntBASIC18.41■□□□□ 0.54
Slc6a7Q6PGE7 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.41■□□□□ 0.54
Slc6a7Q6PGE7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a7Q6PGE7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Slc6a7Q6PGE7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a7Q6PGE7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slc6a7Q6PGE7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.4■□□□□ 0.54
Slc6a7Q6PGE7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a7Q6PGE7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a7Q6PGE7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a7Q6PGE7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a7Q6PGE7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a7Q6PGE7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc6a7Q6PGE7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Slc6a7Q6PGE7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Slc6a7Q6PGE7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
Slc6a7Q6PGE7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a7Q6PGE7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a7Q6PGE7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
Slc6a7Q6PGE7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a7Q6PGE7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a7Q6PGE7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a7Q6PGE7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a7Q6PGE7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Slc6a7Q6PGE7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Slc6a7Q6PGE7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc6a7Q6PGE7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.39■□□□□ 0.53
Slc6a7Q6PGE7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a7Q6PGE7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Slc6a7Q6PGE7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a7Q6PGE7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a7Q6PGE7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a7Q6PGE7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.38■□□□□ 0.53
Slc6a7Q6PGE7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a7Q6PGE7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a7Q6PGE7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a7Q6PGE7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a7Q6PGE7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a7Q6PGE7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a7Q6PGE7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a7Q6PGE7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a7Q6PGE7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a7Q6PGE7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc6a7Q6PGE7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a7Q6PGE7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a7Q6PGE7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a7Q6PGE7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a7Q6PGE7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a7Q6PGE7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a7Q6PGE7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a7Q6PGE7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a7Q6PGE7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc6a7Q6PGE7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a7Q6PGE7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Slc6a7Q6PGE7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a7Q6PGE7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Slc6a7Q6PGE7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a7Q6PGE7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Slc6a7Q6PGE7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a7Q6PGE7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a7Q6PGE7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a7Q6PGE7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Slc6a7Q6PGE7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a7Q6PGE7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a7Q6PGE7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Slc6a7Q6PGE7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc6a7Q6PGE7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Slc6a7Q6PGE7 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.35■□□□□ 0.53
Slc6a7Q6PGE7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a7Q6PGE7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a7Q6PGE7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a7Q6PGE7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a7Q6PGE7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Slc6a7Q6PGE7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a7Q6PGE7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Slc6a7Q6PGE7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc6a7Q6PGE7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a7Q6PGE7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a7Q6PGE7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Slc6a7Q6PGE7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a7Q6PGE7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Slc6a7Q6PGE7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Slc6a7Q6PGE7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Slc6a7Q6PGE7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.34■□□□□ 0.53
Slc6a7Q6PGE7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a7Q6PGE7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc6a7Q6PGE7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms