Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scube3Q66PY1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scube3Q66PY1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scube3Q66PY1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.35■■□□□ 1.01
Scube3Q66PY1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.35■■□□□ 1.01
Scube3Q66PY1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scube3Q66PY1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scube3Q66PY1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scube3Q66PY1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Scube3Q66PY1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scube3Q66PY1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scube3Q66PY1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Scube3Q66PY1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scube3Q66PY1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scube3Q66PY1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Scube3Q66PY1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scube3Q66PY1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scube3Q66PY1 Gm43530-201ENSMUST00000195920 274 ntBASIC21.33■■□□□ 1.01
Scube3Q66PY1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Scube3Q66PY1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Scube3Q66PY1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Scube3Q66PY1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.33■■□□□ 1
Scube3Q66PY1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Scube3Q66PY1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scube3Q66PY1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scube3Q66PY1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scube3Q66PY1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scube3Q66PY1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scube3Q66PY1 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.32■■□□□ 1
Scube3Q66PY1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scube3Q66PY1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scube3Q66PY1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.32■■□□□ 1
Scube3Q66PY1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
Scube3Q66PY1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.32■■□□□ 1
Scube3Q66PY1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Scube3Q66PY1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scube3Q66PY1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Scube3Q66PY1 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.31■■□□□ 1
Scube3Q66PY1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.31■■□□□ 1
Scube3Q66PY1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scube3Q66PY1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.31■■□□□ 1
Scube3Q66PY1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.31■■□□□ 1
Scube3Q66PY1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Scube3Q66PY1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.31■■□□□ 1
Scube3Q66PY1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.31■■□□□ 1
Scube3Q66PY1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Scube3Q66PY1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scube3Q66PY1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scube3Q66PY1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scube3Q66PY1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scube3Q66PY1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.31■■□□□ 1
Scube3Q66PY1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.3■■□□□ 1
Scube3Q66PY1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.3■■□□□ 1
Scube3Q66PY1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.3■■□□□ 1
Scube3Q66PY1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.3■■□□□ 1
Scube3Q66PY1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.3■■□□□ 1
Scube3Q66PY1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Scube3Q66PY1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scube3Q66PY1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.29■■□□□ 1
Scube3Q66PY1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Scube3Q66PY1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scube3Q66PY1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scube3Q66PY1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scube3Q66PY1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.29■■□□□ 1
Scube3Q66PY1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Scube3Q66PY1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.29■■□□□ 1
Scube3Q66PY1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scube3Q66PY1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.28■■□□□ 1
Scube3Q66PY1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scube3Q66PY1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Scube3Q66PY1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scube3Q66PY1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.28■■□□□ 1
Scube3Q66PY1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.28■■□□□ 1
Scube3Q66PY1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.28■■□□□ 1
Scube3Q66PY1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Scube3Q66PY1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.28■■□□□ 1
Scube3Q66PY1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.27■■□□□ 1
Scube3Q66PY1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.27■■□□□ 1
Scube3Q66PY1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.27■■□□□ 1
Scube3Q66PY1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Scube3Q66PY1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.27■■□□□ 1
Scube3Q66PY1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.27■■□□□ 1
Scube3Q66PY1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scube3Q66PY1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.27■■□□□ 1
Scube3Q66PY1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Scube3Q66PY1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Scube3Q66PY1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Scube3Q66PY1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Scube3Q66PY1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Scube3Q66PY1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Scube3Q66PY1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Scube3Q66PY1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scube3Q66PY1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scube3Q66PY1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Scube3Q66PY1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scube3Q66PY1 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.25■□□□□ 0.99
Scube3Q66PY1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scube3Q66PY1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scube3Q66PY1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Scube3Q66PY1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms