Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-3Q5R1I1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-3Q5R1I1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-3Q5R1I1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-3Q5R1I1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-3Q5R1I1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-3Q5R1I1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-3Q5R1I1 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.87□□□□□ -0.03
Trav7d-3Q5R1I1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-3Q5R1I1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-3Q5R1I1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7d-3Q5R1I1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7d-3Q5R1I1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7d-3Q5R1I1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7d-3Q5R1I1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trav7d-3Q5R1I1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7d-3Q5R1I1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7d-3Q5R1I1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7d-3Q5R1I1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7d-3Q5R1I1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7d-3Q5R1I1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7d-3Q5R1I1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7d-3Q5R1I1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7d-3Q5R1I1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav7d-3Q5R1I1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav7d-3Q5R1I1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.85□□□□□ -0.03
Trav7d-3Q5R1I1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav7d-3Q5R1I1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav7d-3Q5R1I1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7d-3Q5R1I1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.85□□□□□ -0.03
Trav7d-3Q5R1I1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7d-3Q5R1I1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7d-3Q5R1I1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.84□□□□□ -0.03
Trav7d-3Q5R1I1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav7d-3Q5R1I1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7d-3Q5R1I1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7d-3Q5R1I1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Trav7d-3Q5R1I1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7d-3Q5R1I1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.84□□□□□ -0.03
Trav7d-3Q5R1I1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7d-3Q5R1I1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav7d-3Q5R1I1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav7d-3Q5R1I1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav7d-3Q5R1I1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trav7d-3Q5R1I1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav7d-3Q5R1I1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-3Q5R1I1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav7d-3Q5R1I1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-3Q5R1I1 Gm43566-201ENSMUST00000196851 808 ntBASIC14.83□□□□□ -0.04
Trav7d-3Q5R1I1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-3Q5R1I1 Gm5921-201ENSMUST00000075898 882 ntBASIC14.83□□□□□ -0.04
Trav7d-3Q5R1I1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-3Q5R1I1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav7d-3Q5R1I1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-3Q5R1I1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-3Q5R1I1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7d-3Q5R1I1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav7d-3Q5R1I1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7d-3Q5R1I1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav7d-3Q5R1I1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav7d-3Q5R1I1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7d-3Q5R1I1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7d-3Q5R1I1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7d-3Q5R1I1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Trav7d-3Q5R1I1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav7d-3Q5R1I1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7d-3Q5R1I1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-3Q5R1I1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.81□□□□□ -0.04
Trav7d-3Q5R1I1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-3Q5R1I1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-3Q5R1I1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav7d-3Q5R1I1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav7d-3Q5R1I1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-3Q5R1I1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav7d-3Q5R1I1 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.81□□□□□ -0.04
Trav7d-3Q5R1I1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-3Q5R1I1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav7d-3Q5R1I1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav7d-3Q5R1I1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav7d-3Q5R1I1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms