Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-3Q5R1E6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Gm43566-201ENSMUST00000196851 808 ntBASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-3Q5R1E6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Trav6-3Q5R1E6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-3Q5R1E6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-3Q5R1E6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-3Q5R1E6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-3Q5R1E6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav6-3Q5R1E6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-3Q5R1E6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-3Q5R1E6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav6-3Q5R1E6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-3Q5R1E6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-3Q5R1E6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Trav6-3Q5R1E6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6-3Q5R1E6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6-3Q5R1E6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-3Q5R1E6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-3Q5R1E6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.33■□□□□ 0.2
Trav6-3Q5R1E6 Gm10399-202ENSMUST00000202768 748 ntBASIC16.33■□□□□ 0.2
Trav6-3Q5R1E6 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.33■□□□□ 0.2
Trav6-3Q5R1E6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-3Q5R1E6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav6-3Q5R1E6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Trav6-3Q5R1E6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-3Q5R1E6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trav6-3Q5R1E6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.32■□□□□ 0.2
Trav6-3Q5R1E6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trav6-3Q5R1E6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-3Q5R1E6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trav6-3Q5R1E6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-3Q5R1E6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-3Q5R1E6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav6-3Q5R1E6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trav6-3Q5R1E6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-3Q5R1E6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-3Q5R1E6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-3Q5R1E6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav6-3Q5R1E6 Gm5921-201ENSMUST00000075898 882 ntBASIC16.31■□□□□ 0.2
Trav6-3Q5R1E6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-3Q5R1E6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-3Q5R1E6 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.31■□□□□ 0.2
Trav6-3Q5R1E6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-3Q5R1E6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-3Q5R1E6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav6-3Q5R1E6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-3Q5R1E6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-3Q5R1E6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-3Q5R1E6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-3Q5R1E6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-3Q5R1E6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-3Q5R1E6 Gm13238-201ENSMUST00000117655 780 ntBASIC16.3■□□□□ 0.2
Trav6-3Q5R1E6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav6-3Q5R1E6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-3Q5R1E6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav6-3Q5R1E6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-3Q5R1E6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-3Q5R1E6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-3Q5R1E6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-3Q5R1E6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-3Q5R1E6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-3Q5R1E6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-3Q5R1E6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-3Q5R1E6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-3Q5R1E6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-3Q5R1E6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-3Q5R1E6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-3Q5R1E6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-3Q5R1E6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trav6-3Q5R1E6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-3Q5R1E6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-3Q5R1E6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-3Q5R1E6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav6-3Q5R1E6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-3Q5R1E6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav6-3Q5R1E6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-3Q5R1E6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-3Q5R1E6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Trav6-3Q5R1E6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-3Q5R1E6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-3Q5R1E6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms