Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Prpf38aQ4FK66 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Prpf38aQ4FK66 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Prpf38aQ4FK66 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prpf38aQ4FK66 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prpf38aQ4FK66 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.82■■□□□ 1.4
Prpf38aQ4FK66 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prpf38aQ4FK66 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC23.82■■□□□ 1.4
Prpf38aQ4FK66 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Prpf38aQ4FK66 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.82■■□□□ 1.4
Prpf38aQ4FK66 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prpf38aQ4FK66 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.82■■□□□ 1.4
Prpf38aQ4FK66 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prpf38aQ4FK66 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prpf38aQ4FK66 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prpf38aQ4FK66 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prpf38aQ4FK66 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Prpf38aQ4FK66 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Prpf38aQ4FK66 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.81■■□□□ 1.4
Prpf38aQ4FK66 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Prpf38aQ4FK66 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Prpf38aQ4FK66 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Prpf38aQ4FK66 Gm12251-201ENSMUST00000117893 792 ntBASIC23.81■■□□□ 1.4
Prpf38aQ4FK66 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.81■■□□□ 1.4
Prpf38aQ4FK66 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Prpf38aQ4FK66 Gm43017-201ENSMUST00000198296 752 ntBASIC23.81■■□□□ 1.4
Prpf38aQ4FK66 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.81■■□□□ 1.4
Prpf38aQ4FK66 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Prpf38aQ4FK66 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Prpf38aQ4FK66 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Prpf38aQ4FK66 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Prpf38aQ4FK66 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Prpf38aQ4FK66 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.8■■□□□ 1.4
Prpf38aQ4FK66 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Prpf38aQ4FK66 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Prpf38aQ4FK66 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Prpf38aQ4FK66 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Prpf38aQ4FK66 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
Prpf38aQ4FK66 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Prpf38aQ4FK66 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Prpf38aQ4FK66 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Prpf38aQ4FK66 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Prpf38aQ4FK66 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Prpf38aQ4FK66 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Prpf38aQ4FK66 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Prpf38aQ4FK66 Gm43173-201ENSMUST00000202246 593 ntBASIC23.78■■□□□ 1.4
Prpf38aQ4FK66 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.78■■□□□ 1.4
Prpf38aQ4FK66 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Prpf38aQ4FK66 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Prpf38aQ4FK66 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Prpf38aQ4FK66 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Prpf38aQ4FK66 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Prpf38aQ4FK66 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
Prpf38aQ4FK66 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Prpf38aQ4FK66 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.77■■□□□ 1.4
Prpf38aQ4FK66 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.77■■□□□ 1.4
Prpf38aQ4FK66 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Prpf38aQ4FK66 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Prpf38aQ4FK66 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.77■■□□□ 1.4
Prpf38aQ4FK66 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Prpf38aQ4FK66 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Prpf38aQ4FK66 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Prpf38aQ4FK66 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Prpf38aQ4FK66 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Prpf38aQ4FK66 Spcs1-204ENSMUST00000226782 949 ntBASIC23.76■■□□□ 1.39
Prpf38aQ4FK66 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Prpf38aQ4FK66 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Prpf38aQ4FK66 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf38aQ4FK66 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
Prpf38aQ4FK66 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf38aQ4FK66 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf38aQ4FK66 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf38aQ4FK66 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf38aQ4FK66 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf38aQ4FK66 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC23.75■■□□□ 1.39
Prpf38aQ4FK66 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf38aQ4FK66 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Prpf38aQ4FK66 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf38aQ4FK66 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf38aQ4FK66 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf38aQ4FK66 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prpf38aQ4FK66 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Prpf38aQ4FK66 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Prpf38aQ4FK66 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Prpf38aQ4FK66 AC122428.2-201ENSMUST00000216321 1832 ntBASIC23.73■■□□□ 1.39
Prpf38aQ4FK66 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Prpf38aQ4FK66 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC23.73■■□□□ 1.39
Prpf38aQ4FK66 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Prpf38aQ4FK66 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Prpf38aQ4FK66 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Prpf38aQ4FK66 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Prpf38aQ4FK66 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Prpf38aQ4FK66 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Prpf38aQ4FK66 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Prpf38aQ4FK66 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Prpf38aQ4FK66 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Prpf38aQ4FK66 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Prpf38aQ4FK66 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.72■■□□□ 1.39
Prpf38aQ4FK66 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Prpf38aQ4FK66 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms