Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Fndc4Q3TR08 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fndc4Q3TR08 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Fndc4Q3TR08 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Fndc4Q3TR08 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.2■□□□□ 0.34
Fndc4Q3TR08 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Fndc4Q3TR08 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Fndc4Q3TR08 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Fndc4Q3TR08 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fndc4Q3TR08 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fndc4Q3TR08 Gm43566-201ENSMUST00000196851 808 ntBASIC17.19■□□□□ 0.34
Fndc4Q3TR08 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fndc4Q3TR08 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fndc4Q3TR08 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.19■□□□□ 0.34
Fndc4Q3TR08 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.19■□□□□ 0.34
Fndc4Q3TR08 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Fndc4Q3TR08 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Fndc4Q3TR08 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fndc4Q3TR08 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fndc4Q3TR08 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.18■□□□□ 0.34
Fndc4Q3TR08 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Fndc4Q3TR08 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fndc4Q3TR08 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Fndc4Q3TR08 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fndc4Q3TR08 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Fndc4Q3TR08 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Fndc4Q3TR08 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Fndc4Q3TR08 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fndc4Q3TR08 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fndc4Q3TR08 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.18■□□□□ 0.34
Fndc4Q3TR08 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Fndc4Q3TR08 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fndc4Q3TR08 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Fndc4Q3TR08 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fndc4Q3TR08 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fndc4Q3TR08 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fndc4Q3TR08 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.17■□□□□ 0.34
Fndc4Q3TR08 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fndc4Q3TR08 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fndc4Q3TR08 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fndc4Q3TR08 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fndc4Q3TR08 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Fndc4Q3TR08 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Fndc4Q3TR08 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Fndc4Q3TR08 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fndc4Q3TR08 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fndc4Q3TR08 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fndc4Q3TR08 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.16■□□□□ 0.34
Fndc4Q3TR08 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Fndc4Q3TR08 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fndc4Q3TR08 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Fndc4Q3TR08 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fndc4Q3TR08 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fndc4Q3TR08 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.16■□□□□ 0.34
Fndc4Q3TR08 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fndc4Q3TR08 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Fndc4Q3TR08 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fndc4Q3TR08 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fndc4Q3TR08 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fndc4Q3TR08 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fndc4Q3TR08 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
Fndc4Q3TR08 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Fndc4Q3TR08 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.15■□□□□ 0.34
Fndc4Q3TR08 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.15■□□□□ 0.34
Fndc4Q3TR08 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Fndc4Q3TR08 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Fndc4Q3TR08 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Fndc4Q3TR08 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.15■□□□□ 0.34
Fndc4Q3TR08 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.15■□□□□ 0.34
Fndc4Q3TR08 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Fndc4Q3TR08 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Fndc4Q3TR08 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fndc4Q3TR08 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fndc4Q3TR08 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fndc4Q3TR08 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Fndc4Q3TR08 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Fndc4Q3TR08 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.14■□□□□ 0.33
Fndc4Q3TR08 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fndc4Q3TR08 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fndc4Q3TR08 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Fndc4Q3TR08 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Fndc4Q3TR08 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fndc4Q3TR08 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fndc4Q3TR08 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Fndc4Q3TR08 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fndc4Q3TR08 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fndc4Q3TR08 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fndc4Q3TR08 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.13■□□□□ 0.33
Fndc4Q3TR08 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Fndc4Q3TR08 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fndc4Q3TR08 Gm13238-201ENSMUST00000117655 780 ntBASIC17.13■□□□□ 0.33
Fndc4Q3TR08 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fndc4Q3TR08 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fndc4Q3TR08 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fndc4Q3TR08 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fndc4Q3TR08 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Fndc4Q3TR08 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fndc4Q3TR08 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fndc4Q3TR08 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Fndc4Q3TR08 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms