Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx3-2P97503 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.14■□□□□ 0.65
Nkx3-2P97503 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx3-2P97503 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx3-2P97503 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx3-2P97503 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Nkx3-2P97503 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.13■□□□□ 0.65
Nkx3-2P97503 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx3-2P97503 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx3-2P97503 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Nkx3-2P97503 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx3-2P97503 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx3-2P97503 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx3-2P97503 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.12■□□□□ 0.65
Nkx3-2P97503 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx3-2P97503 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx3-2P97503 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.12■□□□□ 0.65
Nkx3-2P97503 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx3-2P97503 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx3-2P97503 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Nkx3-2P97503 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Nkx3-2P97503 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.11■□□□□ 0.65
Nkx3-2P97503 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Nkx3-2P97503 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx3-2P97503 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx3-2P97503 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx3-2P97503 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Nkx3-2P97503 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx3-2P97503 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx3-2P97503 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx3-2P97503 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx3-2P97503 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx3-2P97503 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx3-2P97503 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Nkx3-2P97503 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx3-2P97503 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Nkx3-2P97503 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx3-2P97503 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx3-2P97503 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx3-2P97503 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.09■□□□□ 0.65
Nkx3-2P97503 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx3-2P97503 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx3-2P97503 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx3-2P97503 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx3-2P97503 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.09■□□□□ 0.65
Nkx3-2P97503 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx3-2P97503 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx3-2P97503 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Nkx3-2P97503 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.09■□□□□ 0.65
Nkx3-2P97503 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nkx3-2P97503 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nkx3-2P97503 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nkx3-2P97503 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nkx3-2P97503 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nkx3-2P97503 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nkx3-2P97503 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Nkx3-2P97503 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Nkx3-2P97503 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Nkx3-2P97503 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.08■□□□□ 0.64
Nkx3-2P97503 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Nkx3-2P97503 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx3-2P97503 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx3-2P97503 Gm45417-201ENSMUST00000209533 758 ntBASIC19.07■□□□□ 0.64
Nkx3-2P97503 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.07■□□□□ 0.64
Nkx3-2P97503 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx3-2P97503 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nkx3-2P97503 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.07■□□□□ 0.64
Nkx3-2P97503 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx3-2P97503 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx3-2P97503 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx3-2P97503 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx3-2P97503 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx3-2P97503 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx3-2P97503 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Nkx3-2P97503 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx3-2P97503 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Nkx3-2P97503 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nkx3-2P97503 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx3-2P97503 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx3-2P97503 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx3-2P97503 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx3-2P97503 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx3-2P97503 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Nkx3-2P97503 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx3-2P97503 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx3-2P97503 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx3-2P97503 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx3-2P97503 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx3-2P97503 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Nkx3-2P97503 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nkx3-2P97503 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx3-2P97503 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx3-2P97503 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx3-2P97503 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.04■□□□□ 0.64
Nkx3-2P97503 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx3-2P97503 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nkx3-2P97503 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Nkx3-2P97503 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx3-2P97503 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.03■□□□□ 0.64
Nkx3-2P97503 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms