Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nkx2-6P43688 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Nkx2-6P43688 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-6P43688 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Nkx2-6P43688 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-6P43688 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nkx2-6P43688 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-6P43688 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.25■□□□□ 0.67
Nkx2-6P43688 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.25■□□□□ 0.67
Nkx2-6P43688 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-6P43688 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.25■□□□□ 0.67
Nkx2-6P43688 Gm8493-201ENSMUST00000196881 489 ntBASIC19.25■□□□□ 0.67
Nkx2-6P43688 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx2-6P43688 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
Nkx2-6P43688 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Nkx2-6P43688 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-6P43688 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-6P43688 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.24■□□□□ 0.67
Nkx2-6P43688 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nkx2-6P43688 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-6P43688 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx2-6P43688 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.24■□□□□ 0.67
Nkx2-6P43688 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Nkx2-6P43688 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Nkx2-6P43688 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-6P43688 Gm43173-201ENSMUST00000202246 593 ntBASIC19.23■□□□□ 0.67
Nkx2-6P43688 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Nkx2-6P43688 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-6P43688 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx2-6P43688 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-6P43688 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Nkx2-6P43688 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-6P43688 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.22■□□□□ 0.67
Nkx2-6P43688 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-6P43688 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.22■□□□□ 0.67
Nkx2-6P43688 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx2-6P43688 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nkx2-6P43688 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
Nkx2-6P43688 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Nkx2-6P43688 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-6P43688 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-6P43688 Gm43017-201ENSMUST00000198296 752 ntBASIC19.21■□□□□ 0.67
Nkx2-6P43688 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-6P43688 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-6P43688 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.21■□□□□ 0.67
Nkx2-6P43688 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx2-6P43688 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.21■□□□□ 0.67
Nkx2-6P43688 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-6P43688 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-6P43688 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-6P43688 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Nkx2-6P43688 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-6P43688 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
Nkx2-6P43688 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-6P43688 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
Nkx2-6P43688 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-6P43688 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-6P43688 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-6P43688 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-6P43688 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-6P43688 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx2-6P43688 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-6P43688 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-6P43688 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-6P43688 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
Nkx2-6P43688 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-6P43688 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx2-6P43688 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-6P43688 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-6P43688 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.18■□□□□ 0.66
Nkx2-6P43688 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Nkx2-6P43688 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nkx2-6P43688 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-6P43688 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx2-6P43688 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-6P43688 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.17■□□□□ 0.66
Nkx2-6P43688 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nkx2-6P43688 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-6P43688 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.17■□□□□ 0.66
Nkx2-6P43688 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.17■□□□□ 0.66
Nkx2-6P43688 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-6P43688 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nkx2-6P43688 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Nkx2-6P43688 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-6P43688 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx2-6P43688 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.17■□□□□ 0.66
Nkx2-6P43688 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Nkx2-6P43688 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.16■□□□□ 0.66
Nkx2-6P43688 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-6P43688 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-6P43688 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-6P43688 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.16■□□□□ 0.66
Nkx2-6P43688 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx2-6P43688 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-6P43688 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-6P43688 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-6P43688 Gm12251-201ENSMUST00000117893 792 ntBASIC19.15■□□□□ 0.66
Nkx2-6P43688 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx2-6P43688 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.15■□□□□ 0.66
Nkx2-6P43688 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms