Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh4P39038 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh4P39038 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh4P39038 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cdh4P39038 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cdh4P39038 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh4P39038 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh4P39038 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cdh4P39038 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdh4P39038 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh4P39038 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh4P39038 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh4P39038 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh4P39038 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh4P39038 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh4P39038 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh4P39038 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh4P39038 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh4P39038 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh4P39038 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh4P39038 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh4P39038 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdh4P39038 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.41■□□□□ 0.7
Cdh4P39038 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh4P39038 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh4P39038 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.41■□□□□ 0.7
Cdh4P39038 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh4P39038 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh4P39038 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.41■□□□□ 0.7
Cdh4P39038 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.41■□□□□ 0.7
Cdh4P39038 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.41■□□□□ 0.7
Cdh4P39038 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdh4P39038 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cdh4P39038 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh4P39038 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh4P39038 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh4P39038 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh4P39038 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cdh4P39038 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.4■□□□□ 0.7
Cdh4P39038 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Cdh4P39038 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdh4P39038 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdh4P39038 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdh4P39038 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
Cdh4P39038 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh4P39038 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Cdh4P39038 Golgb1-201ENSMUST00000023534 498 ntBASIC19.39■□□□□ 0.69
Cdh4P39038 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh4P39038 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cdh4P39038 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdh4P39038 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh4P39038 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh4P39038 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cdh4P39038 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.38■□□□□ 0.69
Cdh4P39038 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh4P39038 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.38■□□□□ 0.69
Cdh4P39038 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh4P39038 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh4P39038 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh4P39038 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh4P39038 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh4P39038 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdh4P39038 Gm13241-201ENSMUST00000094493 780 ntBASIC19.38■□□□□ 0.69
Cdh4P39038 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh4P39038 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh4P39038 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh4P39038 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.37■□□□□ 0.69
Cdh4P39038 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Cdh4P39038 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cdh4P39038 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh4P39038 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh4P39038 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdh4P39038 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh4P39038 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cdh4P39038 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh4P39038 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh4P39038 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh4P39038 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.35■□□□□ 0.69
Cdh4P39038 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh4P39038 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh4P39038 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cdh4P39038 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Cdh4P39038 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh4P39038 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh4P39038 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh4P39038 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh4P39038 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh4P39038 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh4P39038 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh4P39038 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh4P39038 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh4P39038 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh4P39038 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.34■□□□□ 0.69
Cdh4P39038 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Cdh4P39038 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh4P39038 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Cdh4P39038 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh4P39038 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh4P39038 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh4P39038 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms