Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf1aP25118 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf1aP25118 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Tnfrsf1aP25118 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.98■□□□□ 0.31
Tnfrsf1aP25118 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.98■□□□□ 0.31
Tnfrsf1aP25118 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Tnfrsf1aP25118 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Tnfrsf1aP25118 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf1aP25118 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.98■□□□□ 0.31
Tnfrsf1aP25118 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tnfrsf1aP25118 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf1aP25118 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf1aP25118 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf1aP25118 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.97■□□□□ 0.31
Tnfrsf1aP25118 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf1aP25118 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf1aP25118 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf1aP25118 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf1aP25118 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf1aP25118 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tnfrsf1aP25118 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf1aP25118 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf1aP25118 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tnfrsf1aP25118 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Tnfrsf1aP25118 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.96■□□□□ 0.31
Tnfrsf1aP25118 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.96■□□□□ 0.31
Tnfrsf1aP25118 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Tnfrsf1aP25118 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.96■□□□□ 0.31
Tnfrsf1aP25118 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Tnfrsf1aP25118 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Tnfrsf1aP25118 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.96■□□□□ 0.3
Tnfrsf1aP25118 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf1aP25118 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf1aP25118 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf1aP25118 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.95■□□□□ 0.3
Tnfrsf1aP25118 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf1aP25118 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf1aP25118 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
Tnfrsf1aP25118 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf1aP25118 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf1aP25118 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf1aP25118 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tnfrsf1aP25118 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Tnfrsf1aP25118 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.94■□□□□ 0.3
Tnfrsf1aP25118 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf1aP25118 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf1aP25118 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Tnfrsf1aP25118 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Tnfrsf1aP25118 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf1aP25118 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.94■□□□□ 0.3
Tnfrsf1aP25118 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf1aP25118 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf1aP25118 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf1aP25118 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf1aP25118 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf1aP25118 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf1aP25118 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf1aP25118 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf1aP25118 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf1aP25118 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf1aP25118 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf1aP25118 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Tnfrsf1aP25118 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf1aP25118 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf1aP25118 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf1aP25118 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.92■□□□□ 0.3
Tnfrsf1aP25118 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf1aP25118 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Tnfrsf1aP25118 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf1aP25118 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.92■□□□□ 0.3
Tnfrsf1aP25118 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf1aP25118 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.92■□□□□ 0.3
Tnfrsf1aP25118 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf1aP25118 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf1aP25118 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1aP25118 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1aP25118 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1aP25118 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1aP25118 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Tnfrsf1aP25118 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Tnfrsf1aP25118 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1aP25118 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.91■□□□□ 0.3
Tnfrsf1aP25118 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Tnfrsf1aP25118 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Tnfrsf1aP25118 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1aP25118 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1aP25118 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Tnfrsf1aP25118 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Tnfrsf1aP25118 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf1aP25118 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Tnfrsf1aP25118 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf1aP25118 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf1aP25118 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf1aP25118 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf1aP25118 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Tnfrsf1aP25118 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf1aP25118 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf1aP25118 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.9■□□□□ 0.3
Tnfrsf1aP25118 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf1aP25118 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms