Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd74P04441 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Cd74P04441 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd74P04441 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd74P04441 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd74P04441 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cd74P04441 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd74P04441 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd74P04441 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cd74P04441 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Cd74P04441 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd74P04441 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cd74P04441 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cd74P04441 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.93■□□□□ 0.3
Cd74P04441 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd74P04441 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cd74P04441 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cd74P04441 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.93■□□□□ 0.3
Cd74P04441 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd74P04441 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd74P04441 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd74P04441 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cd74P04441 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd74P04441 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.92■□□□□ 0.3
Cd74P04441 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cd74P04441 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
Cd74P04441 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd74P04441 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd74P04441 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.92■□□□□ 0.3
Cd74P04441 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cd74P04441 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd74P04441 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cd74P04441 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cd74P04441 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd74P04441 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd74P04441 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cd74P04441 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd74P04441 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cd74P04441 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.91■□□□□ 0.3
Cd74P04441 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd74P04441 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.91■□□□□ 0.3
Cd74P04441 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cd74P04441 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.91■□□□□ 0.3
Cd74P04441 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd74P04441 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cd74P04441 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cd74P04441 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd74P04441 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cd74P04441 Golph3-202ENSMUST00000226517 2359 ntBASIC16.91■□□□□ 0.3
Cd74P04441 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cd74P04441 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd74P04441 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cd74P04441 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cd74P04441 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cd74P04441 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cd74P04441 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd74P04441 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.9■□□□□ 0.3
Cd74P04441 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cd74P04441 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd74P04441 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.89■□□□□ 0.3
Cd74P04441 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cd74P04441 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cd74P04441 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cd74P04441 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cd74P04441 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd74P04441 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd74P04441 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cd74P04441 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.89■□□□□ 0.29
Cd74P04441 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd74P04441 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd74P04441 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cd74P04441 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.89■□□□□ 0.29
Cd74P04441 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd74P04441 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd74P04441 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.89■□□□□ 0.29
Cd74P04441 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd74P04441 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd74P04441 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.88■□□□□ 0.29
Cd74P04441 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd74P04441 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd74P04441 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd74P04441 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd74P04441 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd74P04441 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cd74P04441 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Cd74P04441 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.88■□□□□ 0.29
Cd74P04441 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd74P04441 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cd74P04441 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd74P04441 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd74P04441 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd74P04441 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cd74P04441 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd74P04441 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd74P04441 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.87■□□□□ 0.29
Cd74P04441 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd74P04441 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd74P04441 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd74P04441 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd74P04441 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms