Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps1O08983 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps1O08983 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.65■□□□□ 0.58
Hps1O08983 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps1O08983 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Hps1O08983 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps1O08983 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hps1O08983 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.64■□□□□ 0.58
Hps1O08983 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps1O08983 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Hps1O08983 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps1O08983 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps1O08983 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps1O08983 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps1O08983 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps1O08983 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps1O08983 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps1O08983 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hps1O08983 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hps1O08983 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hps1O08983 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Hps1O08983 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hps1O08983 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hps1O08983 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.63■□□□□ 0.57
Hps1O08983 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hps1O08983 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.63■□□□□ 0.57
Hps1O08983 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hps1O08983 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.63■□□□□ 0.57
Hps1O08983 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Hps1O08983 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hps1O08983 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hps1O08983 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hps1O08983 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hps1O08983 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Hps1O08983 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hps1O08983 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hps1O08983 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hps1O08983 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hps1O08983 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hps1O08983 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hps1O08983 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hps1O08983 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hps1O08983 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hps1O08983 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hps1O08983 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Hps1O08983 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hps1O08983 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hps1O08983 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hps1O08983 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hps1O08983 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hps1O08983 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hps1O08983 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Hps1O08983 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.61■□□□□ 0.57
Hps1O08983 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Hps1O08983 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hps1O08983 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hps1O08983 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hps1O08983 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hps1O08983 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hps1O08983 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
Hps1O08983 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hps1O08983 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.6■□□□□ 0.57
Hps1O08983 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
Hps1O08983 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hps1O08983 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hps1O08983 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hps1O08983 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hps1O08983 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hps1O08983 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hps1O08983 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hps1O08983 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hps1O08983 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hps1O08983 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hps1O08983 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hps1O08983 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.59■□□□□ 0.57
Hps1O08983 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hps1O08983 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hps1O08983 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hps1O08983 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hps1O08983 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.58■□□□□ 0.57
Hps1O08983 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hps1O08983 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hps1O08983 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hps1O08983 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hps1O08983 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.58■□□□□ 0.56
Hps1O08983 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hps1O08983 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hps1O08983 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hps1O08983 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.58■□□□□ 0.56
Hps1O08983 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hps1O08983 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Hps1O08983 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Hps1O08983 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.57■□□□□ 0.56
Hps1O08983 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Hps1O08983 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hps1O08983 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Hps1O08983 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hps1O08983 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.57■□□□□ 0.56
Hps1O08983 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hps1O08983 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms