Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ube4aE9Q735 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ube4aE9Q735 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ube4aE9Q735 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ube4aE9Q735 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ube4aE9Q735 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Ube4aE9Q735 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ube4aE9Q735 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC24.7■■□□□ 1.54
Ube4aE9Q735 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Ube4aE9Q735 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ube4aE9Q735 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ube4aE9Q735 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ube4aE9Q735 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ube4aE9Q735 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC24.69■■□□□ 1.54
Ube4aE9Q735 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ube4aE9Q735 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ube4aE9Q735 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ube4aE9Q735 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Ube4aE9Q735 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Ube4aE9Q735 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ube4aE9Q735 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ube4aE9Q735 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC24.68■■□□□ 1.54
Ube4aE9Q735 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Ube4aE9Q735 Gm43060-201ENSMUST00000200621 289 ntBASIC24.68■■□□□ 1.54
Ube4aE9Q735 Gm5874-201ENSMUST00000096101 508 ntBASIC24.68■■□□□ 1.54
Ube4aE9Q735 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Ube4aE9Q735 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ube4aE9Q735 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ube4aE9Q735 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Ube4aE9Q735 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ube4aE9Q735 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ube4aE9Q735 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC24.67■■□□□ 1.54
Ube4aE9Q735 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC24.67■■□□□ 1.54
Ube4aE9Q735 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ube4aE9Q735 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ube4aE9Q735 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ube4aE9Q735 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ube4aE9Q735 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ube4aE9Q735 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ube4aE9Q735 Smad6-203ENSMUST00000179458 273 ntBASIC24.66■■□□□ 1.54
Ube4aE9Q735 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ube4aE9Q735 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ube4aE9Q735 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ube4aE9Q735 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ube4aE9Q735 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ube4aE9Q735 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
Ube4aE9Q735 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ube4aE9Q735 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Ube4aE9Q735 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ube4aE9Q735 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ube4aE9Q735 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ube4aE9Q735 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC24.64■■□□□ 1.54
Ube4aE9Q735 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
Ube4aE9Q735 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ube4aE9Q735 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ube4aE9Q735 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ube4aE9Q735 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ube4aE9Q735 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC24.63■■□□□ 1.53
Ube4aE9Q735 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ube4aE9Q735 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ube4aE9Q735 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ube4aE9Q735 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
Ube4aE9Q735 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC24.63■■□□□ 1.53
Ube4aE9Q735 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Ube4aE9Q735 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ube4aE9Q735 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ube4aE9Q735 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC24.62■■□□□ 1.53
Ube4aE9Q735 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ube4aE9Q735 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ube4aE9Q735 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ube4aE9Q735 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ube4aE9Q735 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ube4aE9Q735 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC24.62■■□□□ 1.53
Ube4aE9Q735 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ube4aE9Q735 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ube4aE9Q735 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Ube4aE9Q735 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ube4aE9Q735 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ube4aE9Q735 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC24.61■■□□□ 1.53
Ube4aE9Q735 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ube4aE9Q735 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC24.61■■□□□ 1.53
Ube4aE9Q735 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ube4aE9Q735 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ube4aE9Q735 Gm26766-202ENSMUST00000227544 2347 ntBASIC24.61■■□□□ 1.53
Ube4aE9Q735 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ube4aE9Q735 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC24.6■■□□□ 1.53
Ube4aE9Q735 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ube4aE9Q735 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC24.6■■□□□ 1.53
Ube4aE9Q735 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC24.6■■□□□ 1.53
Ube4aE9Q735 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Ube4aE9Q735 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ube4aE9Q735 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ube4aE9Q735 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ube4aE9Q735 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ube4aE9Q735 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC24.59■■□□□ 1.53
Ube4aE9Q735 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC24.59■■□□□ 1.53
Ube4aE9Q735 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC24.59■■□□□ 1.53
Ube4aE9Q735 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ube4aE9Q735 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ube4aE9Q735 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC24.58■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms