Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Gm5538W4VSP6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.92■□□□□ 0.94
Gm5538W4VSP6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Gm5538W4VSP6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm5538W4VSP6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm5538W4VSP6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm5538W4VSP6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm5538W4VSP6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm5538W4VSP6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm5538W4VSP6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm5538W4VSP6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm5538W4VSP6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Gm5538W4VSP6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm5538W4VSP6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm5538W4VSP6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Gm5538W4VSP6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm5538W4VSP6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm5538W4VSP6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm5538W4VSP6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm5538W4VSP6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm5538W4VSP6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm5538W4VSP6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm5538W4VSP6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm5538W4VSP6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm5538W4VSP6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm5538W4VSP6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm5538W4VSP6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm5538W4VSP6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm5538W4VSP6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Gm5538W4VSP6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Gm5538W4VSP6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm5538W4VSP6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm5538W4VSP6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm5538W4VSP6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Gm5538W4VSP6 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.89■□□□□ 0.93
Gm5538W4VSP6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm5538W4VSP6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gm5538W4VSP6 Gm22238-201ENSMUST00000175222 88 ntBASIC20.88■□□□□ 0.93
Gm5538W4VSP6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm5538W4VSP6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm5538W4VSP6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm5538W4VSP6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm5538W4VSP6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm5538W4VSP6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Gm5538W4VSP6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Gm5538W4VSP6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm5538W4VSP6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm5538W4VSP6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm5538W4VSP6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.86■□□□□ 0.93
Gm5538W4VSP6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.86■□□□□ 0.93
Gm5538W4VSP6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm5538W4VSP6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm5538W4VSP6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.86■□□□□ 0.93
Gm5538W4VSP6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm5538W4VSP6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm5538W4VSP6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gm5538W4VSP6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm5538W4VSP6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gm5538W4VSP6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm5538W4VSP6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm5538W4VSP6 Gm7143-201ENSMUST00000222811 859 ntBASIC20.85■□□□□ 0.93
Gm5538W4VSP6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Gm5538W4VSP6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm5538W4VSP6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm5538W4VSP6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gm5538W4VSP6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Gm5538W4VSP6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm5538W4VSP6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm5538W4VSP6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm5538W4VSP6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm5538W4VSP6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm5538W4VSP6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.84■□□□□ 0.93
Gm5538W4VSP6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.84■□□□□ 0.93
Gm5538W4VSP6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.84■□□□□ 0.93
Gm5538W4VSP6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm5538W4VSP6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm5538W4VSP6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm5538W4VSP6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gm5538W4VSP6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Gm5538W4VSP6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
Gm5538W4VSP6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gm5538W4VSP6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm5538W4VSP6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm5538W4VSP6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Gm5538W4VSP6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm5538W4VSP6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Gm5538W4VSP6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gm5538W4VSP6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5538W4VSP6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Gm5538W4VSP6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5538W4VSP6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5538W4VSP6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5538W4VSP6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5538W4VSP6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5538W4VSP6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Gm5538W4VSP6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5538W4VSP6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Gm5538W4VSP6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm5538W4VSP6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5538W4VSP6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms