Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb1S4R1E0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
H2afb1S4R1E0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb1S4R1E0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb1S4R1E0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb1S4R1E0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb1S4R1E0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb1S4R1E0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.42■□□□□ 0.54
H2afb1S4R1E0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb1S4R1E0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
H2afb1S4R1E0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb1S4R1E0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb1S4R1E0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
H2afb1S4R1E0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb1S4R1E0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb1S4R1E0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb1S4R1E0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb1S4R1E0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb1S4R1E0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
H2afb1S4R1E0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
H2afb1S4R1E0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb1S4R1E0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb1S4R1E0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
H2afb1S4R1E0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.41■□□□□ 0.54
H2afb1S4R1E0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb1S4R1E0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1S4R1E0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.4■□□□□ 0.54
H2afb1S4R1E0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1S4R1E0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1S4R1E0 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.4■□□□□ 0.54
H2afb1S4R1E0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
H2afb1S4R1E0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1S4R1E0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1S4R1E0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1S4R1E0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1S4R1E0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1S4R1E0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1S4R1E0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1S4R1E0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1S4R1E0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
H2afb1S4R1E0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
H2afb1S4R1E0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb1S4R1E0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
H2afb1S4R1E0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb1S4R1E0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb1S4R1E0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb1S4R1E0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb1S4R1E0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb1S4R1E0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb1S4R1E0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
H2afb1S4R1E0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb1S4R1E0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.38■□□□□ 0.53
H2afb1S4R1E0 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.38■□□□□ 0.53
H2afb1S4R1E0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb1S4R1E0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb1S4R1E0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
H2afb1S4R1E0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb1S4R1E0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb1S4R1E0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb1S4R1E0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb1S4R1E0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb1S4R1E0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
H2afb1S4R1E0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb1S4R1E0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb1S4R1E0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb1S4R1E0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb1S4R1E0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
H2afb1S4R1E0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb1S4R1E0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb1S4R1E0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb1S4R1E0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb1S4R1E0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb1S4R1E0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
H2afb1S4R1E0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.36■□□□□ 0.53
H2afb1S4R1E0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
H2afb1S4R1E0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.36■□□□□ 0.53
H2afb1S4R1E0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.36■□□□□ 0.53
H2afb1S4R1E0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
H2afb1S4R1E0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb1S4R1E0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb1S4R1E0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb1S4R1E0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb1S4R1E0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
H2afb1S4R1E0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb1S4R1E0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb1S4R1E0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb1S4R1E0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb1S4R1E0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
H2afb1S4R1E0 Cap2-205ENSMUST00000225824 1634 ntBASIC18.34■□□□□ 0.53
H2afb1S4R1E0 Golph3-202ENSMUST00000226517 2359 ntBASIC18.34■□□□□ 0.53
H2afb1S4R1E0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb1S4R1E0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb1S4R1E0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb1S4R1E0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb1S4R1E0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
H2afb1S4R1E0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
H2afb1S4R1E0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb1S4R1E0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb1S4R1E0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.34■□□□□ 0.53
H2afb1S4R1E0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms