Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Herpud1Q9JJK5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Herpud1Q9JJK5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Herpud1Q9JJK5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Herpud1Q9JJK5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Herpud1Q9JJK5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Herpud1Q9JJK5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Herpud1Q9JJK5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Herpud1Q9JJK5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Herpud1Q9JJK5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Herpud1Q9JJK5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Herpud1Q9JJK5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Herpud1Q9JJK5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Herpud1Q9JJK5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Herpud1Q9JJK5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.94■□□□□ 0.3
Herpud1Q9JJK5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.94■□□□□ 0.3
Herpud1Q9JJK5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Herpud1Q9JJK5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Herpud1Q9JJK5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Herpud1Q9JJK5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Herpud1Q9JJK5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Herpud1Q9JJK5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Herpud1Q9JJK5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Herpud1Q9JJK5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Herpud1Q9JJK5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Herpud1Q9JJK5 Gm13238-201ENSMUST00000117655 780 ntBASIC16.93■□□□□ 0.3
Herpud1Q9JJK5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Herpud1Q9JJK5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Herpud1Q9JJK5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.93■□□□□ 0.3
Herpud1Q9JJK5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Herpud1Q9JJK5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Herpud1Q9JJK5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Herpud1Q9JJK5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Herpud1Q9JJK5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Herpud1Q9JJK5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Herpud1Q9JJK5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.92■□□□□ 0.3
Herpud1Q9JJK5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.92■□□□□ 0.3
Herpud1Q9JJK5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Herpud1Q9JJK5 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.92■□□□□ 0.3
Herpud1Q9JJK5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.92■□□□□ 0.3
Herpud1Q9JJK5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Herpud1Q9JJK5 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.92■□□□□ 0.3
Herpud1Q9JJK5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Herpud1Q9JJK5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Herpud1Q9JJK5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herpud1Q9JJK5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Herpud1Q9JJK5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herpud1Q9JJK5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herpud1Q9JJK5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herpud1Q9JJK5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herpud1Q9JJK5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Herpud1Q9JJK5 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herpud1Q9JJK5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Herpud1Q9JJK5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herpud1Q9JJK5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herpud1Q9JJK5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herpud1Q9JJK5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Herpud1Q9JJK5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herpud1Q9JJK5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herpud1Q9JJK5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herpud1Q9JJK5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Herpud1Q9JJK5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herpud1Q9JJK5 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Herpud1Q9JJK5 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.9■□□□□ 0.3
Herpud1Q9JJK5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herpud1Q9JJK5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herpud1Q9JJK5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herpud1Q9JJK5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herpud1Q9JJK5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Herpud1Q9JJK5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herpud1Q9JJK5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Herpud1Q9JJK5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.89■□□□□ 0.29
Herpud1Q9JJK5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Herpud1Q9JJK5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Herpud1Q9JJK5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Herpud1Q9JJK5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.89■□□□□ 0.29
Herpud1Q9JJK5 Gm43566-201ENSMUST00000196851 808 ntBASIC16.89■□□□□ 0.29
Herpud1Q9JJK5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Herpud1Q9JJK5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Herpud1Q9JJK5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Herpud1Q9JJK5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Herpud1Q9JJK5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Herpud1Q9JJK5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herpud1Q9JJK5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herpud1Q9JJK5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herpud1Q9JJK5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herpud1Q9JJK5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herpud1Q9JJK5 Gm5921-201ENSMUST00000075898 882 ntBASIC16.88■□□□□ 0.29
Herpud1Q9JJK5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herpud1Q9JJK5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herpud1Q9JJK5 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.88■□□□□ 0.29
Herpud1Q9JJK5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Herpud1Q9JJK5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Herpud1Q9JJK5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Herpud1Q9JJK5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Herpud1Q9JJK5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Herpud1Q9JJK5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.87■□□□□ 0.29
Herpud1Q9JJK5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Herpud1Q9JJK5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Herpud1Q9JJK5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 118.2 ms