Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.58■□□□□ 0.57
Hmg20aQ9DC33 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hmg20aQ9DC33 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.58■□□□□ 0.57
Hmg20aQ9DC33 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hmg20aQ9DC33 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Hmg20aQ9DC33 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hmg20aQ9DC33 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Hmg20aQ9DC33 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmg20aQ9DC33 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Hmg20aQ9DC33 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.58■□□□□ 0.56
Hmg20aQ9DC33 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmg20aQ9DC33 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.58■□□□□ 0.56
Hmg20aQ9DC33 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hmg20aQ9DC33 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmg20aQ9DC33 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmg20aQ9DC33 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hmg20aQ9DC33 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hmg20aQ9DC33 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.57■□□□□ 0.56
Hmg20aQ9DC33 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Hmg20aQ9DC33 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hmg20aQ9DC33 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmg20aQ9DC33 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmg20aQ9DC33 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Hmg20aQ9DC33 Mir3960-201ENSMUST00000198213 73 ntBASIC18.56■□□□□ 0.56
Hmg20aQ9DC33 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.56■□□□□ 0.56
Hmg20aQ9DC33 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.56■□□□□ 0.56
Hmg20aQ9DC33 Gm9812-201ENSMUST00000061934 968 ntBASIC18.56■□□□□ 0.56
Hmg20aQ9DC33 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hmg20aQ9DC33 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Hmg20aQ9DC33 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmg20aQ9DC33 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.56■□□□□ 0.56
Hmg20aQ9DC33 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmg20aQ9DC33 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmg20aQ9DC33 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hmg20aQ9DC33 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hmg20aQ9DC33 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Hmg20aQ9DC33 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20aQ9DC33 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmg20aQ9DC33 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Hmg20aQ9DC33 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.55■□□□□ 0.56
Hmg20aQ9DC33 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hmg20aQ9DC33 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Hmg20aQ9DC33 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Hmg20aQ9DC33 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20aQ9DC33 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20aQ9DC33 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.54■□□□□ 0.56
Hmg20aQ9DC33 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Hmg20aQ9DC33 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20aQ9DC33 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.54■□□□□ 0.56
Hmg20aQ9DC33 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Hmg20aQ9DC33 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20aQ9DC33 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20aQ9DC33 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hmg20aQ9DC33 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 Gm45364-201ENSMUST00000210883 159 ntBASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmg20aQ9DC33 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20aQ9DC33 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20aQ9DC33 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.52■□□□□ 0.56
Hmg20aQ9DC33 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Hmg20aQ9DC33 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20aQ9DC33 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20aQ9DC33 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20aQ9DC33 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20aQ9DC33 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20aQ9DC33 Gm7432-201ENSMUST00000210343 879 ntBASIC18.52■□□□□ 0.56
Hmg20aQ9DC33 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.52■□□□□ 0.56
Hmg20aQ9DC33 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20aQ9DC33 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmg20aQ9DC33 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hmg20aQ9DC33 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmg20aQ9DC33 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.51■□□□□ 0.55
Hmg20aQ9DC33 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.51■□□□□ 0.55
Hmg20aQ9DC33 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Hmg20aQ9DC33 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmg20aQ9DC33 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmg20aQ9DC33 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Hmg20aQ9DC33 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.51■□□□□ 0.55
Hmg20aQ9DC33 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmg20aQ9DC33 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmg20aQ9DC33 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hmg20aQ9DC33 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmg20aQ9DC33 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmg20aQ9DC33 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms