Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim33Q99PP7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim33Q99PP7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim33Q99PP7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.15■□□□□ 0.82
Trim33Q99PP7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim33Q99PP7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim33Q99PP7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.15■□□□□ 0.82
Trim33Q99PP7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim33Q99PP7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim33Q99PP7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.15■□□□□ 0.82
Trim33Q99PP7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim33Q99PP7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Trim33Q99PP7 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.14■□□□□ 0.81
Trim33Q99PP7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim33Q99PP7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim33Q99PP7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim33Q99PP7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim33Q99PP7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim33Q99PP7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim33Q99PP7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim33Q99PP7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim33Q99PP7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim33Q99PP7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim33Q99PP7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim33Q99PP7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim33Q99PP7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim33Q99PP7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Trim33Q99PP7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim33Q99PP7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim33Q99PP7 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.12■□□□□ 0.81
Trim33Q99PP7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim33Q99PP7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim33Q99PP7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim33Q99PP7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.12■□□□□ 0.81
Trim33Q99PP7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trim33Q99PP7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim33Q99PP7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim33Q99PP7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim33Q99PP7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim33Q99PP7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim33Q99PP7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim33Q99PP7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim33Q99PP7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim33Q99PP7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim33Q99PP7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim33Q99PP7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim33Q99PP7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim33Q99PP7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim33Q99PP7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trim33Q99PP7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim33Q99PP7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim33Q99PP7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim33Q99PP7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim33Q99PP7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Trim33Q99PP7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim33Q99PP7 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.09■□□□□ 0.81
Trim33Q99PP7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim33Q99PP7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim33Q99PP7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim33Q99PP7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim33Q99PP7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim33Q99PP7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim33Q99PP7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim33Q99PP7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim33Q99PP7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
Trim33Q99PP7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim33Q99PP7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.09■□□□□ 0.81
Trim33Q99PP7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim33Q99PP7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim33Q99PP7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim33Q99PP7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.08■□□□□ 0.81
Trim33Q99PP7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim33Q99PP7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.08■□□□□ 0.81
Trim33Q99PP7 Gm22238-201ENSMUST00000175222 88 ntBASIC20.08■□□□□ 0.81
Trim33Q99PP7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.08■□□□□ 0.81
Trim33Q99PP7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Trim33Q99PP7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim33Q99PP7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.08■□□□□ 0.8
Trim33Q99PP7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim33Q99PP7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Trim33Q99PP7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim33Q99PP7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Trim33Q99PP7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim33Q99PP7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim33Q99PP7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim33Q99PP7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim33Q99PP7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim33Q99PP7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim33Q99PP7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trim33Q99PP7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim33Q99PP7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim33Q99PP7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim33Q99PP7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim33Q99PP7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim33Q99PP7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim33Q99PP7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim33Q99PP7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trim33Q99PP7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim33Q99PP7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim33Q99PP7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms