Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Raf1Q99N57 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raf1Q99N57 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raf1Q99N57 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Raf1Q99N57 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raf1Q99N57 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.21■□□□□ 0.51
Raf1Q99N57 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.21■□□□□ 0.51
Raf1Q99N57 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raf1Q99N57 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raf1Q99N57 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Raf1Q99N57 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Raf1Q99N57 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raf1Q99N57 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Raf1Q99N57 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raf1Q99N57 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raf1Q99N57 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raf1Q99N57 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Raf1Q99N57 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Raf1Q99N57 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.2■□□□□ 0.5
Raf1Q99N57 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Raf1Q99N57 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Raf1Q99N57 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Raf1Q99N57 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Raf1Q99N57 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Raf1Q99N57 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.2■□□□□ 0.5
Raf1Q99N57 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Raf1Q99N57 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Raf1Q99N57 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Raf1Q99N57 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Raf1Q99N57 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Raf1Q99N57 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Raf1Q99N57 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Raf1Q99N57 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Raf1Q99N57 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Raf1Q99N57 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.19■□□□□ 0.5
Raf1Q99N57 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Raf1Q99N57 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Raf1Q99N57 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Raf1Q99N57 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raf1Q99N57 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Raf1Q99N57 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raf1Q99N57 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.18■□□□□ 0.5
Raf1Q99N57 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raf1Q99N57 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raf1Q99N57 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raf1Q99N57 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raf1Q99N57 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Raf1Q99N57 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.17■□□□□ 0.5
Raf1Q99N57 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Raf1Q99N57 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Raf1Q99N57 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raf1Q99N57 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raf1Q99N57 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raf1Q99N57 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Raf1Q99N57 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Raf1Q99N57 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raf1Q99N57 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raf1Q99N57 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raf1Q99N57 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raf1Q99N57 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raf1Q99N57 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Raf1Q99N57 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Raf1Q99N57 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Raf1Q99N57 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.16■□□□□ 0.5
Raf1Q99N57 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.16■□□□□ 0.5
Raf1Q99N57 Gm9959-201ENSMUST00000068277 390 ntBASIC18.16■□□□□ 0.5
Raf1Q99N57 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raf1Q99N57 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Raf1Q99N57 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Raf1Q99N57 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Raf1Q99N57 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Raf1Q99N57 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raf1Q99N57 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raf1Q99N57 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Raf1Q99N57 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Raf1Q99N57 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raf1Q99N57 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.15■□□□□ 0.5
Raf1Q99N57 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raf1Q99N57 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raf1Q99N57 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raf1Q99N57 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Raf1Q99N57 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Raf1Q99N57 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raf1Q99N57 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raf1Q99N57 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raf1Q99N57 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.14■□□□□ 0.49
Raf1Q99N57 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.14■□□□□ 0.49
Raf1Q99N57 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raf1Q99N57 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raf1Q99N57 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raf1Q99N57 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raf1Q99N57 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raf1Q99N57 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Raf1Q99N57 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.13■□□□□ 0.49
Raf1Q99N57 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.13■□□□□ 0.49
Raf1Q99N57 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Raf1Q99N57 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Raf1Q99N57 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Raf1Q99N57 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Raf1Q99N57 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms