Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.24■□□□□ 0.99
Pcdhgb1Q91XX8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb1Q91XX8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhgb1Q91XX8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb1Q91XX8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb1Q91XX8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb1Q91XX8 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.23■□□□□ 0.99
Pcdhgb1Q91XX8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.23■□□□□ 0.99
Pcdhgb1Q91XX8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb1Q91XX8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb1Q91XX8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb1Q91XX8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb1Q91XX8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb1Q91XX8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb1Q91XX8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb1Q91XX8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb1Q91XX8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb1Q91XX8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb1Q91XX8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb1Q91XX8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb1Q91XX8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb1Q91XX8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb1Q91XX8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdhgb1Q91XX8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Pcdhgb1Q91XX8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb1Q91XX8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Pcdhgb1Q91XX8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb1Q91XX8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdhgb1Q91XX8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb1Q91XX8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb1Q91XX8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pcdhgb1Q91XX8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb1Q91XX8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb1Q91XX8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.2■□□□□ 0.98
Pcdhgb1Q91XX8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.2■□□□□ 0.98
Pcdhgb1Q91XX8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb1Q91XX8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb1Q91XX8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb1Q91XX8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.2■□□□□ 0.98
Pcdhgb1Q91XX8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Pcdhgb1Q91XX8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb1Q91XX8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb1Q91XX8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb1Q91XX8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb1Q91XX8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb1Q91XX8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb1Q91XX8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb1Q91XX8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb1Q91XX8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb1Q91XX8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb1Q91XX8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Pcdhgb1Q91XX8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.18■□□□□ 0.98
Pcdhgb1Q91XX8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgb1Q91XX8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgb1Q91XX8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgb1Q91XX8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgb1Q91XX8 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.18■□□□□ 0.98
Pcdhgb1Q91XX8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhgb1Q91XX8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhgb1Q91XX8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb1Q91XX8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb1Q91XX8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Pcdhgb1Q91XX8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhgb1Q91XX8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb1Q91XX8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb1Q91XX8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb1Q91XX8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb1Q91XX8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb1Q91XX8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.16■□□□□ 0.98
Pcdhgb1Q91XX8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb1Q91XX8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb1Q91XX8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb1Q91XX8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pcdhgb1Q91XX8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb1Q91XX8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.15■□□□□ 0.98
Pcdhgb1Q91XX8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb1Q91XX8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb1Q91XX8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb1Q91XX8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb1Q91XX8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdhgb1Q91XX8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb1Q91XX8 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.15■□□□□ 0.98
Pcdhgb1Q91XX8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.15■□□□□ 0.98
Pcdhgb1Q91XX8 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.14■□□□□ 0.98
Pcdhgb1Q91XX8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb1Q91XX8 Gm43137-201ENSMUST00000198052 594 ntBASIC21.14■□□□□ 0.97
Pcdhgb1Q91XX8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb1Q91XX8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb1Q91XX8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb1Q91XX8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Pcdhgb1Q91XX8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Pcdhgb1Q91XX8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.14■□□□□ 0.97
Pcdhgb1Q91XX8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb1Q91XX8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Pcdhgb1Q91XX8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb1Q91XX8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Pcdhgb1Q91XX8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb1Q91XX8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb1Q91XX8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb1Q91XX8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms