Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgc3Q91XX1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgc3Q91XX1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgc3Q91XX1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgc3Q91XX1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pcdhgc3Q91XX1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.27■□□□□ 0.68
Pcdhgc3Q91XX1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.27■□□□□ 0.67
Pcdhgc3Q91XX1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhgc3Q91XX1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhgc3Q91XX1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgc3Q91XX1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgc3Q91XX1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgc3Q91XX1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgc3Q91XX1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgc3Q91XX1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhgc3Q91XX1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgc3Q91XX1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.25■□□□□ 0.67
Pcdhgc3Q91XX1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgc3Q91XX1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgc3Q91XX1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgc3Q91XX1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgc3Q91XX1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgc3Q91XX1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgc3Q91XX1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhgc3Q91XX1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgc3Q91XX1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhgc3Q91XX1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgc3Q91XX1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgc3Q91XX1 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.23■□□□□ 0.67
Pcdhgc3Q91XX1 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.23■□□□□ 0.67
Pcdhgc3Q91XX1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.23■□□□□ 0.67
Pcdhgc3Q91XX1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgc3Q91XX1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgc3Q91XX1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgc3Q91XX1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pcdhgc3Q91XX1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdhgc3Q91XX1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgc3Q91XX1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.22■□□□□ 0.67
Pcdhgc3Q91XX1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhgc3Q91XX1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgc3Q91XX1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgc3Q91XX1 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.22■□□□□ 0.67
Pcdhgc3Q91XX1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdhgc3Q91XX1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgc3Q91XX1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgc3Q91XX1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhgc3Q91XX1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhgc3Q91XX1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.21■□□□□ 0.67
Pcdhgc3Q91XX1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgc3Q91XX1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgc3Q91XX1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgc3Q91XX1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgc3Q91XX1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgc3Q91XX1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
Pcdhgc3Q91XX1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc3Q91XX1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.2■□□□□ 0.66
Pcdhgc3Q91XX1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc3Q91XX1 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.2■□□□□ 0.66
Pcdhgc3Q91XX1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc3Q91XX1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc3Q91XX1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdhgc3Q91XX1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc3Q91XX1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc3Q91XX1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdhgc3Q91XX1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc3Q91XX1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc3Q91XX1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc3Q91XX1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdhgc3Q91XX1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdhgc3Q91XX1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc3Q91XX1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgc3Q91XX1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.19■□□□□ 0.66
Pcdhgc3Q91XX1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgc3Q91XX1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgc3Q91XX1 Mir6538-201ENSMUST00000183713 110 ntBASIC19.19■□□□□ 0.66
Pcdhgc3Q91XX1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdhgc3Q91XX1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgc3Q91XX1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgc3Q91XX1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgc3Q91XX1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgc3Q91XX1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Pcdhgc3Q91XX1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgc3Q91XX1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgc3Q91XX1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgc3Q91XX1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pcdhgc3Q91XX1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pcdhgc3Q91XX1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pcdhgc3Q91XX1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgc3Q91XX1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgc3Q91XX1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgc3Q91XX1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgc3Q91XX1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgc3Q91XX1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgc3Q91XX1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgc3Q91XX1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhgc3Q91XX1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pcdhgc3Q91XX1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhgc3Q91XX1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhgc3Q91XX1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgc3Q91XX1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms