Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Ddx41Q91VN6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx41Q91VN6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
Ddx41Q91VN6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx41Q91VN6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx41Q91VN6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx41Q91VN6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx41Q91VN6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ddx41Q91VN6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ddx41Q91VN6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ddx41Q91VN6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ddx41Q91VN6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.35■■□□□ 1.33
Ddx41Q91VN6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ddx41Q91VN6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ddx41Q91VN6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ddx41Q91VN6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ddx41Q91VN6 Gm12821-201ENSMUST00000120022 600 ntBASIC23.34■■□□□ 1.33
Ddx41Q91VN6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ddx41Q91VN6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ddx41Q91VN6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ddx41Q91VN6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.33■■□□□ 1.33
Ddx41Q91VN6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ddx41Q91VN6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.33■■□□□ 1.33
Ddx41Q91VN6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ddx41Q91VN6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.33■■□□□ 1.33
Ddx41Q91VN6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ddx41Q91VN6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Ddx41Q91VN6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
Ddx41Q91VN6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ddx41Q91VN6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ddx41Q91VN6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ddx41Q91VN6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ddx41Q91VN6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
Ddx41Q91VN6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Ddx41Q91VN6 Gm27454-201ENSMUST00000185090 204 ntBASIC23.32■■□□□ 1.32
Ddx41Q91VN6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Ddx41Q91VN6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ddx41Q91VN6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Ddx41Q91VN6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ddx41Q91VN6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC23.31■■□□□ 1.32
Ddx41Q91VN6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC23.31■■□□□ 1.32
Ddx41Q91VN6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ddx41Q91VN6 Gm4430-201ENSMUST00000192413 1943 ntBASIC23.31■■□□□ 1.32
Ddx41Q91VN6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ddx41Q91VN6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ddx41Q91VN6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Ddx41Q91VN6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Ddx41Q91VN6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ddx41Q91VN6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Ddx41Q91VN6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ddx41Q91VN6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.3■■□□□ 1.32
Ddx41Q91VN6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ddx41Q91VN6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ddx41Q91VN6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ddx41Q91VN6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ddx41Q91VN6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ddx41Q91VN6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ddx41Q91VN6 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.29■■□□□ 1.32
Ddx41Q91VN6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.29■■□□□ 1.32
Ddx41Q91VN6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.29■■□□□ 1.32
Ddx41Q91VN6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC23.29■■□□□ 1.32
Ddx41Q91VN6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.29■■□□□ 1.32
Ddx41Q91VN6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ddx41Q91VN6 Gm9870-201ENSMUST00000063874 645 ntBASIC23.29■■□□□ 1.32
Ddx41Q91VN6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ddx41Q91VN6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ddx41Q91VN6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ddx41Q91VN6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx41Q91VN6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx41Q91VN6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23.28■■□□□ 1.32
Ddx41Q91VN6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx41Q91VN6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx41Q91VN6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx41Q91VN6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ddx41Q91VN6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ddx41Q91VN6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ddx41Q91VN6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC23.27■■□□□ 1.32
Ddx41Q91VN6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC23.27■■□□□ 1.32
Ddx41Q91VN6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx41Q91VN6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx41Q91VN6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.26■■□□□ 1.31
Ddx41Q91VN6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx41Q91VN6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx41Q91VN6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
Ddx41Q91VN6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Ddx41Q91VN6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Ddx41Q91VN6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx41Q91VN6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx41Q91VN6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx41Q91VN6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx41Q91VN6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Ddx41Q91VN6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx41Q91VN6 Gm45417-201ENSMUST00000209533 758 ntBASIC23.25■■□□□ 1.31
Ddx41Q91VN6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx41Q91VN6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx41Q91VN6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx41Q91VN6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx41Q91VN6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ddx41Q91VN6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ddx41Q91VN6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms