Protein–RNA interactions for Protein: Q8VHI7

Ccdc65, Coiled-coil domain-containing protein 65, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc65Q8VHI7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc65Q8VHI7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Ccdc65Q8VHI7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc65Q8VHI7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc65Q8VHI7 Gm40881-201ENSMUST00000223397 166 ntBASIC21.52■■□□□ 1.04
Ccdc65Q8VHI7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc65Q8VHI7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc65Q8VHI7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc65Q8VHI7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.03
Ccdc65Q8VHI7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Ccdc65Q8VHI7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc65Q8VHI7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc65Q8VHI7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.51■■□□□ 1.03
Ccdc65Q8VHI7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc65Q8VHI7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc65Q8VHI7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.5■■□□□ 1.03
Ccdc65Q8VHI7 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.5■■□□□ 1.03
Ccdc65Q8VHI7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc65Q8VHI7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Ccdc65Q8VHI7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ccdc65Q8VHI7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ccdc65Q8VHI7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc65Q8VHI7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc65Q8VHI7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc65Q8VHI7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Ccdc65Q8VHI7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc65Q8VHI7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ccdc65Q8VHI7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc65Q8VHI7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc65Q8VHI7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc65Q8VHI7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Ccdc65Q8VHI7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc65Q8VHI7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc65Q8VHI7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc65Q8VHI7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc65Q8VHI7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc65Q8VHI7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Ccdc65Q8VHI7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.49■■□□□ 1.03
Ccdc65Q8VHI7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc65Q8VHI7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc65Q8VHI7 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.49■■□□□ 1.03
Ccdc65Q8VHI7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc65Q8VHI7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc65Q8VHI7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc65Q8VHI7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc65Q8VHI7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
Ccdc65Q8VHI7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.49■■□□□ 1.03
Ccdc65Q8VHI7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc65Q8VHI7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc65Q8VHI7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc65Q8VHI7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc65Q8VHI7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc65Q8VHI7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc65Q8VHI7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc65Q8VHI7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc65Q8VHI7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc65Q8VHI7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.47■■□□□ 1.03
Ccdc65Q8VHI7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc65Q8VHI7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc65Q8VHI7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc65Q8VHI7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc65Q8VHI7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc65Q8VHI7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Ccdc65Q8VHI7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc65Q8VHI7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.46■■□□□ 1.03
Ccdc65Q8VHI7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.46■■□□□ 1.03
Ccdc65Q8VHI7 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.46■■□□□ 1.03
Ccdc65Q8VHI7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc65Q8VHI7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Ccdc65Q8VHI7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Ccdc65Q8VHI7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc65Q8VHI7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc65Q8VHI7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.45■■□□□ 1.02
Ccdc65Q8VHI7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Ccdc65Q8VHI7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc65Q8VHI7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc65Q8VHI7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc65Q8VHI7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc65Q8VHI7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Ccdc65Q8VHI7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc65Q8VHI7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc65Q8VHI7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc65Q8VHI7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc65Q8VHI7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc65Q8VHI7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.44■■□□□ 1.02
Ccdc65Q8VHI7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.44■■□□□ 1.02
Ccdc65Q8VHI7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc65Q8VHI7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc65Q8VHI7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc65Q8VHI7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc65Q8VHI7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc65Q8VHI7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc65Q8VHI7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Ccdc65Q8VHI7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc65Q8VHI7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc65Q8VHI7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc65Q8VHI7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc65Q8VHI7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc65Q8VHI7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ccdc65Q8VHI7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms