Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q8VDP2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.8■□□□□ 0.76
Q8VDP2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q8VDP2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Q8VDP2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Q8VDP2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Q8VDP2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.8■□□□□ 0.76
Q8VDP2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Q8VDP2 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.8■□□□□ 0.76
Q8VDP2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Q8VDP2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Q8VDP2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Q8VDP2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q8VDP2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Q8VDP2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Q8VDP2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Q8VDP2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Q8VDP2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Q8VDP2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q8VDP2 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.78■□□□□ 0.76
Q8VDP2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Q8VDP2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q8VDP2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.78■□□□□ 0.76
Q8VDP2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q8VDP2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q8VDP2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.78■□□□□ 0.76
Q8VDP2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Q8VDP2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q8VDP2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Q8VDP2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.78■□□□□ 0.76
Q8VDP2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Q8VDP2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.77■□□□□ 0.76
Q8VDP2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.77■□□□□ 0.76
Q8VDP2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Q8VDP2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q8VDP2 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.77■□□□□ 0.76
Q8VDP2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q8VDP2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q8VDP2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Q8VDP2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Q8VDP2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Q8VDP2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Q8VDP2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Q8VDP2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Q8VDP2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q8VDP2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Q8VDP2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q8VDP2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q8VDP2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q8VDP2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q8VDP2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Q8VDP2 Gm7432-201ENSMUST00000210343 879 ntBASIC19.76■□□□□ 0.75
Q8VDP2 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.76■□□□□ 0.75
Q8VDP2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q8VDP2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Q8VDP2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q8VDP2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Q8VDP2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q8VDP2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Q8VDP2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q8VDP2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q8VDP2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q8VDP2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Q8VDP2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.75■□□□□ 0.75
Q8VDP2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.75■□□□□ 0.75
Q8VDP2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Q8VDP2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q8VDP2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q8VDP2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Q8VDP2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q8VDP2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Q8VDP2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q8VDP2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Q8VDP2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Q8VDP2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.75■□□□□ 0.75
Q8VDP2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Q8VDP2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q8VDP2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Q8VDP2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Q8VDP2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q8VDP2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q8VDP2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q8VDP2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q8VDP2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q8VDP2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q8VDP2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q8VDP2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q8VDP2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q8VDP2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.72■□□□□ 0.75
Q8VDP2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q8VDP2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q8VDP2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.72■□□□□ 0.75
Q8VDP2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q8VDP2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Q8VDP2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Q8VDP2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q8VDP2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q8VDP2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q8VDP2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q8VDP2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms