Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.8■□□□□ 0.92
Sh3rf2Q8BZT2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Sh3rf2Q8BZT2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3rf2Q8BZT2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.8■□□□□ 0.92
Sh3rf2Q8BZT2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3rf2Q8BZT2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.8■□□□□ 0.92
Sh3rf2Q8BZT2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3rf2Q8BZT2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3rf2Q8BZT2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sh3rf2Q8BZT2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.8■□□□□ 0.92
Sh3rf2Q8BZT2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3rf2Q8BZT2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3rf2Q8BZT2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Sh3rf2Q8BZT2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3rf2Q8BZT2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Sh3rf2Q8BZT2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3rf2Q8BZT2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3rf2Q8BZT2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sh3rf2Q8BZT2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3rf2Q8BZT2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3rf2Q8BZT2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3rf2Q8BZT2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sh3rf2Q8BZT2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.78■□□□□ 0.92
Sh3rf2Q8BZT2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Sh3rf2Q8BZT2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Sh3rf2Q8BZT2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.77■□□□□ 0.92
Sh3rf2Q8BZT2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3rf2Q8BZT2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.77■□□□□ 0.92
Sh3rf2Q8BZT2 Gm8493-201ENSMUST00000196881 489 ntBASIC20.77■□□□□ 0.92
Sh3rf2Q8BZT2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sh3rf2Q8BZT2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Sh3rf2Q8BZT2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sh3rf2Q8BZT2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Sh3rf2Q8BZT2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sh3rf2Q8BZT2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sh3rf2Q8BZT2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sh3rf2Q8BZT2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.76■□□□□ 0.91
Sh3rf2Q8BZT2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Sh3rf2Q8BZT2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sh3rf2Q8BZT2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Sh3rf2Q8BZT2 Gm43017-201ENSMUST00000198296 752 ntBASIC20.76■□□□□ 0.91
Sh3rf2Q8BZT2 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.76■□□□□ 0.91
Sh3rf2Q8BZT2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sh3rf2Q8BZT2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3rf2Q8BZT2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sh3rf2Q8BZT2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Sh3rf2Q8BZT2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3rf2Q8BZT2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3rf2Q8BZT2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3rf2Q8BZT2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3rf2Q8BZT2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3rf2Q8BZT2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.74■□□□□ 0.91
Sh3rf2Q8BZT2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3rf2Q8BZT2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sh3rf2Q8BZT2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Sh3rf2Q8BZT2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3rf2Q8BZT2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Sh3rf2Q8BZT2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3rf2Q8BZT2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3rf2Q8BZT2 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.73■□□□□ 0.91
Sh3rf2Q8BZT2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Sh3rf2Q8BZT2 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.73■□□□□ 0.91
Sh3rf2Q8BZT2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3rf2Q8BZT2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3rf2Q8BZT2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3rf2Q8BZT2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sh3rf2Q8BZT2 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.72■□□□□ 0.91
Sh3rf2Q8BZT2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3rf2Q8BZT2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3rf2Q8BZT2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3rf2Q8BZT2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
Sh3rf2Q8BZT2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.72■□□□□ 0.91
Sh3rf2Q8BZT2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.72■□□□□ 0.91
Sh3rf2Q8BZT2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Sh3rf2Q8BZT2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3rf2Q8BZT2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3rf2Q8BZT2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3rf2Q8BZT2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sh3rf2Q8BZT2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3rf2Q8BZT2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.71■□□□□ 0.91
Sh3rf2Q8BZT2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Sh3rf2Q8BZT2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Sh3rf2Q8BZT2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3rf2Q8BZT2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3rf2Q8BZT2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sh3rf2Q8BZT2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3rf2Q8BZT2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.7■□□□□ 0.9
Sh3rf2Q8BZT2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3rf2Q8BZT2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3rf2Q8BZT2 Gm12251-201ENSMUST00000117893 792 ntBASIC20.7■□□□□ 0.9
Sh3rf2Q8BZT2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3rf2Q8BZT2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Sh3rf2Q8BZT2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sh3rf2Q8BZT2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.69■□□□□ 0.9
Sh3rf2Q8BZT2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3rf2Q8BZT2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3rf2Q8BZT2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
Sh3rf2Q8BZT2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Sh3rf2Q8BZT2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3rf2Q8BZT2 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms