Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.8■■□□□ 1.08
Nop53Q8BK35 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nop53Q8BK35 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Nop53Q8BK35 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nop53Q8BK35 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nop53Q8BK35 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Nop53Q8BK35 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nop53Q8BK35 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.79■■□□□ 1.08
Nop53Q8BK35 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nop53Q8BK35 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nop53Q8BK35 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nop53Q8BK35 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Nop53Q8BK35 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nop53Q8BK35 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nop53Q8BK35 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nop53Q8BK35 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.78■■□□□ 1.08
Nop53Q8BK35 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nop53Q8BK35 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nop53Q8BK35 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nop53Q8BK35 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.77■■□□□ 1.08
Nop53Q8BK35 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nop53Q8BK35 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Nop53Q8BK35 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nop53Q8BK35 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.77■■□□□ 1.07
Nop53Q8BK35 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nop53Q8BK35 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nop53Q8BK35 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nop53Q8BK35 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nop53Q8BK35 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nop53Q8BK35 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nop53Q8BK35 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nop53Q8BK35 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nop53Q8BK35 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.76■■□□□ 1.07
Nop53Q8BK35 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Nop53Q8BK35 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Nop53Q8BK35 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nop53Q8BK35 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nop53Q8BK35 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Nop53Q8BK35 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Nop53Q8BK35 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.75■■□□□ 1.07
Nop53Q8BK35 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nop53Q8BK35 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nop53Q8BK35 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nop53Q8BK35 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nop53Q8BK35 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nop53Q8BK35 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nop53Q8BK35 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nop53Q8BK35 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Nop53Q8BK35 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nop53Q8BK35 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nop53Q8BK35 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Nop53Q8BK35 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nop53Q8BK35 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Nop53Q8BK35 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.73■■□□□ 1.07
Nop53Q8BK35 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.73■■□□□ 1.07
Nop53Q8BK35 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.73■■□□□ 1.07
Nop53Q8BK35 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nop53Q8BK35 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.73■■□□□ 1.07
Nop53Q8BK35 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nop53Q8BK35 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nop53Q8BK35 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nop53Q8BK35 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nop53Q8BK35 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nop53Q8BK35 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nop53Q8BK35 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nop53Q8BK35 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nop53Q8BK35 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nop53Q8BK35 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nop53Q8BK35 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nop53Q8BK35 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nop53Q8BK35 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Nop53Q8BK35 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nop53Q8BK35 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nop53Q8BK35 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.71■■□□□ 1.07
Nop53Q8BK35 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Nop53Q8BK35 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nop53Q8BK35 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nop53Q8BK35 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nop53Q8BK35 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Nop53Q8BK35 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nop53Q8BK35 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.7■■□□□ 1.06
Nop53Q8BK35 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.7■■□□□ 1.06
Nop53Q8BK35 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nop53Q8BK35 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nop53Q8BK35 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nop53Q8BK35 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nop53Q8BK35 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.69■■□□□ 1.06
Nop53Q8BK35 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nop53Q8BK35 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nop53Q8BK35 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nop53Q8BK35 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Nop53Q8BK35 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.69■■□□□ 1.06
Nop53Q8BK35 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Nop53Q8BK35 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nop53Q8BK35 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nop53Q8BK35 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nop53Q8BK35 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nop53Q8BK35 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Nop53Q8BK35 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nop53Q8BK35 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms