Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trappc6aQ78XR0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trappc6aQ78XR0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Trappc6aQ78XR0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trappc6aQ78XR0 Gm43060-201ENSMUST00000200621 289 ntBASIC20.31■□□□□ 0.84
Trappc6aQ78XR0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.31■□□□□ 0.84
Trappc6aQ78XR0 Spcs1-204ENSMUST00000226782 949 ntBASIC20.31■□□□□ 0.84
Trappc6aQ78XR0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trappc6aQ78XR0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trappc6aQ78XR0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trappc6aQ78XR0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trappc6aQ78XR0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.3■□□□□ 0.84
Trappc6aQ78XR0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Trappc6aQ78XR0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trappc6aQ78XR0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trappc6aQ78XR0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trappc6aQ78XR0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trappc6aQ78XR0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trappc6aQ78XR0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trappc6aQ78XR0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trappc6aQ78XR0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.3■□□□□ 0.84
Trappc6aQ78XR0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
Trappc6aQ78XR0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trappc6aQ78XR0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trappc6aQ78XR0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
Trappc6aQ78XR0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trappc6aQ78XR0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trappc6aQ78XR0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trappc6aQ78XR0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trappc6aQ78XR0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trappc6aQ78XR0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trappc6aQ78XR0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trappc6aQ78XR0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trappc6aQ78XR0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trappc6aQ78XR0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trappc6aQ78XR0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Trappc6aQ78XR0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trappc6aQ78XR0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trappc6aQ78XR0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.27■□□□□ 0.84
Trappc6aQ78XR0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trappc6aQ78XR0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Trappc6aQ78XR0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trappc6aQ78XR0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trappc6aQ78XR0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trappc6aQ78XR0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trappc6aQ78XR0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.26■□□□□ 0.83
Trappc6aQ78XR0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.26■□□□□ 0.83
Trappc6aQ78XR0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trappc6aQ78XR0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.26■□□□□ 0.83
Trappc6aQ78XR0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trappc6aQ78XR0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trappc6aQ78XR0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trappc6aQ78XR0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trappc6aQ78XR0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.25■□□□□ 0.83
Trappc6aQ78XR0 Gm10493-201ENSMUST00000097270 612 ntBASIC20.25■□□□□ 0.83
Trappc6aQ78XR0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trappc6aQ78XR0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trappc6aQ78XR0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.24■□□□□ 0.83
Trappc6aQ78XR0 Gm7291-201ENSMUST00000199147 382 ntBASIC20.24■□□□□ 0.83
Trappc6aQ78XR0 Gm40848-201ENSMUST00000221998 324 ntBASIC20.24■□□□□ 0.83
Trappc6aQ78XR0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Trappc6aQ78XR0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trappc6aQ78XR0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trappc6aQ78XR0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Trappc6aQ78XR0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trappc6aQ78XR0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trappc6aQ78XR0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trappc6aQ78XR0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trappc6aQ78XR0 Gm42569-201ENSMUST00000200539 472 ntBASIC20.23■□□□□ 0.83
Trappc6aQ78XR0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trappc6aQ78XR0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trappc6aQ78XR0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Trappc6aQ78XR0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trappc6aQ78XR0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trappc6aQ78XR0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Trappc6aQ78XR0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trappc6aQ78XR0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.22■□□□□ 0.83
Trappc6aQ78XR0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trappc6aQ78XR0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trappc6aQ78XR0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trappc6aQ78XR0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trappc6aQ78XR0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Trappc6aQ78XR0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.22■□□□□ 0.83
Trappc6aQ78XR0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Trappc6aQ78XR0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trappc6aQ78XR0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trappc6aQ78XR0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
Trappc6aQ78XR0 Gm42642-201ENSMUST00000200683 355 ntBASIC20.21■□□□□ 0.83
Trappc6aQ78XR0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.21■□□□□ 0.83
Trappc6aQ78XR0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trappc6aQ78XR0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trappc6aQ78XR0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trappc6aQ78XR0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.2■□□□□ 0.82
Trappc6aQ78XR0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trappc6aQ78XR0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trappc6aQ78XR0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trappc6aQ78XR0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trappc6aQ78XR0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.2■□□□□ 0.82
Trappc6aQ78XR0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trappc6aQ78XR0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms