Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lsm8Q6ZWM4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Lsm8Q6ZWM4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lsm8Q6ZWM4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Lsm8Q6ZWM4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Lsm8Q6ZWM4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lsm8Q6ZWM4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Lsm8Q6ZWM4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm8Q6ZWM4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm8Q6ZWM4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm8Q6ZWM4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm8Q6ZWM4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.49■■□□□ 1.03
Lsm8Q6ZWM4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Lsm8Q6ZWM4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.49■■□□□ 1.03
Lsm8Q6ZWM4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm8Q6ZWM4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm8Q6ZWM4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm8Q6ZWM4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm8Q6ZWM4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm8Q6ZWM4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm8Q6ZWM4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm8Q6ZWM4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Lsm8Q6ZWM4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm8Q6ZWM4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm8Q6ZWM4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm8Q6ZWM4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm8Q6ZWM4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm8Q6ZWM4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm8Q6ZWM4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm8Q6ZWM4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lsm8Q6ZWM4 Gm45102-201ENSMUST00000207427 857 ntBASIC21.47■■□□□ 1.03
Lsm8Q6ZWM4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
Lsm8Q6ZWM4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lsm8Q6ZWM4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.47■■□□□ 1.03
Lsm8Q6ZWM4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Lsm8Q6ZWM4 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.47■■□□□ 1.03
Lsm8Q6ZWM4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.46■■□□□ 1.03
Lsm8Q6ZWM4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lsm8Q6ZWM4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Lsm8Q6ZWM4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.46■■□□□ 1.03
Lsm8Q6ZWM4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsm8Q6ZWM4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm8Q6ZWM4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm8Q6ZWM4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm8Q6ZWM4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm8Q6ZWM4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm8Q6ZWM4 Rps24-207ENSMUST00000224568 714 ntBASIC21.45■■□□□ 1.02
Lsm8Q6ZWM4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm8Q6ZWM4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm8Q6ZWM4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
Lsm8Q6ZWM4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm8Q6ZWM4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm8Q6ZWM4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm8Q6ZWM4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm8Q6ZWM4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.44■■□□□ 1.02
Lsm8Q6ZWM4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm8Q6ZWM4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm8Q6ZWM4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm8Q6ZWM4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm8Q6ZWM4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm8Q6ZWM4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Lsm8Q6ZWM4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm8Q6ZWM4 Gm9870-201ENSMUST00000063874 645 ntBASIC21.43■■□□□ 1.02
Lsm8Q6ZWM4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm8Q6ZWM4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm8Q6ZWM4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm8Q6ZWM4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Lsm8Q6ZWM4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm8Q6ZWM4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Lsm8Q6ZWM4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm8Q6ZWM4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm8Q6ZWM4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm8Q6ZWM4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.42■■□□□ 1.02
Lsm8Q6ZWM4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm8Q6ZWM4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm8Q6ZWM4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm8Q6ZWM4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm8Q6ZWM4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Lsm8Q6ZWM4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm8Q6ZWM4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm8Q6ZWM4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
Lsm8Q6ZWM4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm8Q6ZWM4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm8Q6ZWM4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm8Q6ZWM4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm8Q6ZWM4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Lsm8Q6ZWM4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm8Q6ZWM4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm8Q6ZWM4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm8Q6ZWM4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm8Q6ZWM4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm8Q6ZWM4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Lsm8Q6ZWM4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm8Q6ZWM4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.4■■□□□ 1.02
Lsm8Q6ZWM4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm8Q6ZWM4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Lsm8Q6ZWM4 Gm22238-201ENSMUST00000175222 88 ntBASIC21.4■■□□□ 1.02
Lsm8Q6ZWM4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.4■■□□□ 1.02
Lsm8Q6ZWM4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm8Q6ZWM4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms