Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clns1aQ61189 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clns1aQ61189 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clns1aQ61189 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Clns1aQ61189 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.43■□□□□ 0.38
Clns1aQ61189 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clns1aQ61189 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clns1aQ61189 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clns1aQ61189 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clns1aQ61189 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clns1aQ61189 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clns1aQ61189 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clns1aQ61189 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clns1aQ61189 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clns1aQ61189 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clns1aQ61189 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clns1aQ61189 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clns1aQ61189 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clns1aQ61189 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.42■□□□□ 0.38
Clns1aQ61189 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clns1aQ61189 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.42■□□□□ 0.38
Clns1aQ61189 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clns1aQ61189 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Clns1aQ61189 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clns1aQ61189 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clns1aQ61189 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clns1aQ61189 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.41■□□□□ 0.38
Clns1aQ61189 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clns1aQ61189 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.41■□□□□ 0.38
Clns1aQ61189 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clns1aQ61189 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clns1aQ61189 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clns1aQ61189 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clns1aQ61189 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clns1aQ61189 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clns1aQ61189 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clns1aQ61189 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clns1aQ61189 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Clns1aQ61189 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clns1aQ61189 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.4■□□□□ 0.38
Clns1aQ61189 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Clns1aQ61189 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clns1aQ61189 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Clns1aQ61189 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Clns1aQ61189 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clns1aQ61189 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clns1aQ61189 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Clns1aQ61189 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clns1aQ61189 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.39■□□□□ 0.37
Clns1aQ61189 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clns1aQ61189 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clns1aQ61189 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clns1aQ61189 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.38■□□□□ 0.37
Clns1aQ61189 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.38■□□□□ 0.37
Clns1aQ61189 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clns1aQ61189 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clns1aQ61189 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clns1aQ61189 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Clns1aQ61189 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clns1aQ61189 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clns1aQ61189 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clns1aQ61189 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clns1aQ61189 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clns1aQ61189 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.37■□□□□ 0.37
Clns1aQ61189 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clns1aQ61189 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clns1aQ61189 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.37■□□□□ 0.37
Clns1aQ61189 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clns1aQ61189 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.37■□□□□ 0.37
Clns1aQ61189 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.37■□□□□ 0.37
Clns1aQ61189 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Clns1aQ61189 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Clns1aQ61189 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.37■□□□□ 0.37
Clns1aQ61189 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clns1aQ61189 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clns1aQ61189 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clns1aQ61189 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clns1aQ61189 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.36■□□□□ 0.37
Clns1aQ61189 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Clns1aQ61189 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clns1aQ61189 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Clns1aQ61189 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clns1aQ61189 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clns1aQ61189 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clns1aQ61189 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clns1aQ61189 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clns1aQ61189 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.35■□□□□ 0.37
Clns1aQ61189 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clns1aQ61189 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Clns1aQ61189 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Clns1aQ61189 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clns1aQ61189 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clns1aQ61189 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clns1aQ61189 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Clns1aQ61189 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clns1aQ61189 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.35■□□□□ 0.37
Clns1aQ61189 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clns1aQ61189 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clns1aQ61189 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clns1aQ61189 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms