Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp25Q3U435 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp25Q3U435 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Mmp25Q3U435 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.28■□□□□ 0.68
Mmp25Q3U435 Gm13241-201ENSMUST00000094493 780 ntBASIC19.28■□□□□ 0.68
Mmp25Q3U435 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Mmp25Q3U435 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Mmp25Q3U435 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.28■□□□□ 0.68
Mmp25Q3U435 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp25Q3U435 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp25Q3U435 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp25Q3U435 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp25Q3U435 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp25Q3U435 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp25Q3U435 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp25Q3U435 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.27■□□□□ 0.67
Mmp25Q3U435 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp25Q3U435 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp25Q3U435 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.26■□□□□ 0.67
Mmp25Q3U435 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp25Q3U435 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp25Q3U435 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp25Q3U435 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Mmp25Q3U435 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Mmp25Q3U435 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp25Q3U435 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp25Q3U435 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp25Q3U435 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.25■□□□□ 0.67
Mmp25Q3U435 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp25Q3U435 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp25Q3U435 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.25■□□□□ 0.67
Mmp25Q3U435 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.25■□□□□ 0.67
Mmp25Q3U435 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp25Q3U435 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Mmp25Q3U435 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Mmp25Q3U435 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Mmp25Q3U435 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.25■□□□□ 0.67
Mmp25Q3U435 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Mmp25Q3U435 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp25Q3U435 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp25Q3U435 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp25Q3U435 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp25Q3U435 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Mmp25Q3U435 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Mmp25Q3U435 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp25Q3U435 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp25Q3U435 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp25Q3U435 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Mmp25Q3U435 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Mmp25Q3U435 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp25Q3U435 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp25Q3U435 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp25Q3U435 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Mmp25Q3U435 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.22■□□□□ 0.67
Mmp25Q3U435 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp25Q3U435 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
Mmp25Q3U435 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp25Q3U435 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp25Q3U435 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp25Q3U435 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp25Q3U435 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp25Q3U435 Gm43530-201ENSMUST00000195920 274 ntBASIC19.21■□□□□ 0.67
Mmp25Q3U435 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp25Q3U435 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp25Q3U435 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Mmp25Q3U435 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp25Q3U435 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Mmp25Q3U435 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp25Q3U435 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.21■□□□□ 0.67
Mmp25Q3U435 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.66
Mmp25Q3U435 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Mmp25Q3U435 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp25Q3U435 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.2■□□□□ 0.66
Mmp25Q3U435 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp25Q3U435 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp25Q3U435 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp25Q3U435 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp25Q3U435 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp25Q3U435 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp25Q3U435 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp25Q3U435 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.19■□□□□ 0.66
Mmp25Q3U435 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp25Q3U435 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.19■□□□□ 0.66
Mmp25Q3U435 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.19■□□□□ 0.66
Mmp25Q3U435 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp25Q3U435 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp25Q3U435 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp25Q3U435 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp25Q3U435 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.19■□□□□ 0.66
Mmp25Q3U435 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.19■□□□□ 0.66
Mmp25Q3U435 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.19■□□□□ 0.66
Mmp25Q3U435 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp25Q3U435 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp25Q3U435 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp25Q3U435 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.18■□□□□ 0.66
Mmp25Q3U435 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp25Q3U435 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp25Q3U435 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.18■□□□□ 0.66
Mmp25Q3U435 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp25Q3U435 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms