Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col10a1Q05306 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col10a1Q05306 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col10a1Q05306 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.82■□□□□ 0.6
Col10a1Q05306 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col10a1Q05306 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
Col10a1Q05306 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.82■□□□□ 0.6
Col10a1Q05306 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.82■□□□□ 0.6
Col10a1Q05306 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.82■□□□□ 0.6
Col10a1Q05306 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col10a1Q05306 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col10a1Q05306 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col10a1Q05306 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col10a1Q05306 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.81■□□□□ 0.6
Col10a1Q05306 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col10a1Q05306 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col10a1Q05306 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.81■□□□□ 0.6
Col10a1Q05306 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col10a1Q05306 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Col10a1Q05306 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col10a1Q05306 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col10a1Q05306 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col10a1Q05306 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col10a1Q05306 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col10a1Q05306 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Col10a1Q05306 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col10a1Q05306 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col10a1Q05306 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col10a1Q05306 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Col10a1Q05306 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col10a1Q05306 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col10a1Q05306 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col10a1Q05306 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col10a1Q05306 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col10a1Q05306 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col10a1Q05306 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col10a1Q05306 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col10a1Q05306 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col10a1Q05306 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col10a1Q05306 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Col10a1Q05306 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col10a1Q05306 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col10a1Q05306 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col10a1Q05306 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col10a1Q05306 Gm7143-201ENSMUST00000222811 859 ntBASIC18.78■□□□□ 0.6
Col10a1Q05306 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.78■□□□□ 0.6
Col10a1Q05306 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Col10a1Q05306 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col10a1Q05306 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col10a1Q05306 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col10a1Q05306 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col10a1Q05306 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col10a1Q05306 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col10a1Q05306 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col10a1Q05306 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.77■□□□□ 0.6
Col10a1Q05306 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col10a1Q05306 Gm9870-201ENSMUST00000063874 645 ntBASIC18.77■□□□□ 0.6
Col10a1Q05306 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col10a1Q05306 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col10a1Q05306 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col10a1Q05306 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Col10a1Q05306 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Col10a1Q05306 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col10a1Q05306 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col10a1Q05306 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.76■□□□□ 0.59
Col10a1Q05306 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.76■□□□□ 0.59
Col10a1Q05306 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
Col10a1Q05306 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Col10a1Q05306 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col10a1Q05306 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col10a1Q05306 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col10a1Q05306 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col10a1Q05306 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.75■□□□□ 0.59
Col10a1Q05306 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Col10a1Q05306 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col10a1Q05306 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col10a1Q05306 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col10a1Q05306 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col10a1Q05306 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col10a1Q05306 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col10a1Q05306 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col10a1Q05306 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col10a1Q05306 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col10a1Q05306 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col10a1Q05306 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col10a1Q05306 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col10a1Q05306 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col10a1Q05306 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col10a1Q05306 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.74■□□□□ 0.59
Col10a1Q05306 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col10a1Q05306 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col10a1Q05306 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col10a1Q05306 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col10a1Q05306 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col10a1Q05306 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.73■□□□□ 0.59
Col10a1Q05306 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.73■□□□□ 0.59
Col10a1Q05306 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col10a1Q05306 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col10a1Q05306 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col10a1Q05306 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms