Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SgcaP82350 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SgcaP82350 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SgcaP82350 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SgcaP82350 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.03■□□□□ 0.32
SgcaP82350 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SgcaP82350 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SgcaP82350 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SgcaP82350 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SgcaP82350 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SgcaP82350 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SgcaP82350 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SgcaP82350 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.02■□□□□ 0.32
SgcaP82350 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SgcaP82350 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.02■□□□□ 0.31
SgcaP82350 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SgcaP82350 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SgcaP82350 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SgcaP82350 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SgcaP82350 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.02■□□□□ 0.31
SgcaP82350 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcaP82350 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcaP82350 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SgcaP82350 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SgcaP82350 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
SgcaP82350 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SgcaP82350 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SgcaP82350 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.01■□□□□ 0.31
SgcaP82350 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SgcaP82350 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcaP82350 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SgcaP82350 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17■□□□□ 0.31
SgcaP82350 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
SgcaP82350 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcaP82350 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcaP82350 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17■□□□□ 0.31
SgcaP82350 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcaP82350 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17■□□□□ 0.31
SgcaP82350 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcaP82350 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17■□□□□ 0.31
SgcaP82350 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcaP82350 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SgcaP82350 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcaP82350 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17■□□□□ 0.31
SgcaP82350 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcaP82350 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SgcaP82350 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
SgcaP82350 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SgcaP82350 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SgcaP82350 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SgcaP82350 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SgcaP82350 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.99■□□□□ 0.31
SgcaP82350 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.99■□□□□ 0.31
SgcaP82350 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SgcaP82350 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
SgcaP82350 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SgcaP82350 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SgcaP82350 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SgcaP82350 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SgcaP82350 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SgcaP82350 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.98■□□□□ 0.31
SgcaP82350 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SgcaP82350 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SgcaP82350 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.98■□□□□ 0.31
SgcaP82350 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SgcaP82350 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.98■□□□□ 0.31
SgcaP82350 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcaP82350 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcaP82350 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SgcaP82350 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SgcaP82350 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SgcaP82350 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcaP82350 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcaP82350 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SgcaP82350 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcaP82350 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcaP82350 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcaP82350 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcaP82350 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcaP82350 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcaP82350 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SgcaP82350 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SgcaP82350 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SgcaP82350 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SgcaP82350 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
SgcaP82350 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SgcaP82350 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SgcaP82350 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SgcaP82350 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SgcaP82350 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SgcaP82350 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SgcaP82350 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SgcaP82350 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.95■□□□□ 0.3
SgcaP82350 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.95■□□□□ 0.3
SgcaP82350 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SgcaP82350 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SgcaP82350 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.95■□□□□ 0.3
SgcaP82350 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SgcaP82350 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SgcaP82350 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms