Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp8O70404 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp8O70404 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp8O70404 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC14.42□□□□□ -0.1
Vamp8O70404 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp8O70404 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp8O70404 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp8O70404 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp8O70404 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp8O70404 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp8O70404 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp8O70404 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Vamp8O70404 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Vamp8O70404 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp8O70404 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp8O70404 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Vamp8O70404 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vamp8O70404 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Vamp8O70404 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.41□□□□□ -0.1
Vamp8O70404 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp8O70404 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Vamp8O70404 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.41□□□□□ -0.1
Vamp8O70404 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Vamp8O70404 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.41□□□□□ -0.1
Vamp8O70404 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp8O70404 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp8O70404 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp8O70404 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Vamp8O70404 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Vamp8O70404 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vamp8O70404 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.41□□□□□ -0.1
Vamp8O70404 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.41□□□□□ -0.1
Vamp8O70404 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp8O70404 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp8O70404 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp8O70404 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp8O70404 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp8O70404 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vamp8O70404 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.4□□□□□ -0.1
Vamp8O70404 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.4□□□□□ -0.11
Vamp8O70404 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vamp8O70404 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp8O70404 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Vamp8O70404 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp8O70404 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.39□□□□□ -0.11
Vamp8O70404 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp8O70404 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.39□□□□□ -0.11
Vamp8O70404 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp8O70404 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Vamp8O70404 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp8O70404 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vamp8O70404 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp8O70404 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp8O70404 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Vamp8O70404 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp8O70404 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC14.38□□□□□ -0.11
Vamp8O70404 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp8O70404 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Vamp8O70404 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp8O70404 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp8O70404 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp8O70404 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp8O70404 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.38□□□□□ -0.11
Vamp8O70404 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.38□□□□□ -0.11
Vamp8O70404 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vamp8O70404 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp8O70404 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp8O70404 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp8O70404 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp8O70404 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp8O70404 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vamp8O70404 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp8O70404 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp8O70404 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp8O70404 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Vamp8O70404 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp8O70404 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vamp8O70404 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Vamp8O70404 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp8O70404 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.36□□□□□ -0.11
Vamp8O70404 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp8O70404 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp8O70404 Gm37136-201ENSMUST00000194368 194 ntBASIC14.36□□□□□ -0.11
Vamp8O70404 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp8O70404 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp8O70404 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp8O70404 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp8O70404 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp8O70404 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp8O70404 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp8O70404 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vamp8O70404 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Vamp8O70404 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp8O70404 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp8O70404 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp8O70404 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp8O70404 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Vamp8O70404 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp8O70404 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vamp8O70404 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 131.8 ms