Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SncaO55042 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SncaO55042 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SncaO55042 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SncaO55042 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
SncaO55042 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SncaO55042 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SncaO55042 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SncaO55042 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SncaO55042 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.83■□□□□ 0.28
SncaO55042 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.83■□□□□ 0.28
SncaO55042 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.83■□□□□ 0.28
SncaO55042 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.83■□□□□ 0.28
SncaO55042 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SncaO55042 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SncaO55042 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SncaO55042 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SncaO55042 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SncaO55042 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SncaO55042 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.82■□□□□ 0.28
SncaO55042 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SncaO55042 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SncaO55042 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.82■□□□□ 0.28
SncaO55042 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SncaO55042 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SncaO55042 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SncaO55042 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.82■□□□□ 0.28
SncaO55042 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
SncaO55042 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.82■□□□□ 0.28
SncaO55042 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SncaO55042 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SncaO55042 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SncaO55042 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.81■□□□□ 0.28
SncaO55042 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SncaO55042 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SncaO55042 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SncaO55042 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SncaO55042 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.81■□□□□ 0.28
SncaO55042 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SncaO55042 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SncaO55042 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SncaO55042 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SncaO55042 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SncaO55042 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SncaO55042 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SncaO55042 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SncaO55042 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SncaO55042 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
SncaO55042 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SncaO55042 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SncaO55042 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SncaO55042 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SncaO55042 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SncaO55042 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SncaO55042 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SncaO55042 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SncaO55042 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SncaO55042 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SncaO55042 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SncaO55042 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SncaO55042 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SncaO55042 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SncaO55042 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SncaO55042 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SncaO55042 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SncaO55042 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SncaO55042 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SncaO55042 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SncaO55042 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SncaO55042 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SncaO55042 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.78■□□□□ 0.28
SncaO55042 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SncaO55042 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SncaO55042 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SncaO55042 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
SncaO55042 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SncaO55042 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SncaO55042 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SncaO55042 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SncaO55042 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SncaO55042 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SncaO55042 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SncaO55042 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SncaO55042 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.77■□□□□ 0.27
SncaO55042 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SncaO55042 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
SncaO55042 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SncaO55042 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SncaO55042 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SncaO55042 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SncaO55042 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SncaO55042 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SncaO55042 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
SncaO55042 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SncaO55042 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SncaO55042 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SncaO55042 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SncaO55042 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SncaO55042 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.76■□□□□ 0.27
SncaO55042 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms