Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
BckdkO55028 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BckdkO55028 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
BckdkO55028 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BckdkO55028 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BckdkO55028 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BckdkO55028 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BckdkO55028 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BckdkO55028 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BckdkO55028 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BckdkO55028 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BckdkO55028 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BckdkO55028 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BckdkO55028 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BckdkO55028 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BckdkO55028 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BckdkO55028 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
BckdkO55028 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BckdkO55028 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BckdkO55028 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BckdkO55028 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.85■□□□□ 0.61
BckdkO55028 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BckdkO55028 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BckdkO55028 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
BckdkO55028 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BckdkO55028 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BckdkO55028 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BckdkO55028 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BckdkO55028 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BckdkO55028 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.84■□□□□ 0.61
BckdkO55028 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BckdkO55028 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.84■□□□□ 0.61
BckdkO55028 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BckdkO55028 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BckdkO55028 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BckdkO55028 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BckdkO55028 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BckdkO55028 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BckdkO55028 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BckdkO55028 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BckdkO55028 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BckdkO55028 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BckdkO55028 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BckdkO55028 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.83■□□□□ 0.6
BckdkO55028 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.82■□□□□ 0.6
BckdkO55028 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BckdkO55028 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BckdkO55028 Gm12922-201ENSMUST00000120626 809 ntBASIC18.82■□□□□ 0.6
BckdkO55028 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BckdkO55028 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BckdkO55028 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.82■□□□□ 0.6
BckdkO55028 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.81■□□□□ 0.6
BckdkO55028 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.81■□□□□ 0.6
BckdkO55028 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
BckdkO55028 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
BckdkO55028 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BckdkO55028 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BckdkO55028 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BckdkO55028 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BckdkO55028 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BckdkO55028 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
BckdkO55028 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BckdkO55028 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BckdkO55028 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BckdkO55028 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BckdkO55028 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BckdkO55028 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BckdkO55028 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BckdkO55028 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.79■□□□□ 0.6
BckdkO55028 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BckdkO55028 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BckdkO55028 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BckdkO55028 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
BckdkO55028 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BckdkO55028 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
BckdkO55028 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BckdkO55028 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BckdkO55028 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BckdkO55028 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BckdkO55028 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BckdkO55028 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BckdkO55028 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
BckdkO55028 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BckdkO55028 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BckdkO55028 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BckdkO55028 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BckdkO55028 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BckdkO55028 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BckdkO55028 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
BckdkO55028 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
BckdkO55028 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BckdkO55028 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.77■□□□□ 0.6
BckdkO55028 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
BckdkO55028 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BckdkO55028 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BckdkO55028 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BckdkO55028 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BckdkO55028 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BckdkO55028 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.77■□□□□ 0.59
BckdkO55028 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms