Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Hps1O08983 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.74■□□□□ 0.59
Hps1O08983 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hps1O08983 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hps1O08983 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hps1O08983 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.74■□□□□ 0.59
Hps1O08983 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hps1O08983 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hps1O08983 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.74■□□□□ 0.59
Hps1O08983 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Hps1O08983 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hps1O08983 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Hps1O08983 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hps1O08983 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.73■□□□□ 0.59
Hps1O08983 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.73■□□□□ 0.59
Hps1O08983 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hps1O08983 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hps1O08983 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hps1O08983 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hps1O08983 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hps1O08983 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hps1O08983 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hps1O08983 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hps1O08983 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Hps1O08983 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hps1O08983 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps1O08983 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Hps1O08983 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps1O08983 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps1O08983 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps1O08983 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps1O08983 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps1O08983 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Hps1O08983 Etf1-202ENSMUST00000180351 108 ntBASIC18.71■□□□□ 0.59
Hps1O08983 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps1O08983 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Hps1O08983 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hps1O08983 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hps1O08983 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hps1O08983 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hps1O08983 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hps1O08983 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hps1O08983 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps1O08983 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Hps1O08983 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps1O08983 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps1O08983 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps1O08983 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.69■□□□□ 0.58
Hps1O08983 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.69■□□□□ 0.58
Hps1O08983 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hps1O08983 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps1O08983 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps1O08983 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Hps1O08983 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Hps1O08983 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps1O08983 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hps1O08983 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.68■□□□□ 0.58
Hps1O08983 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps1O08983 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.68■□□□□ 0.58
Hps1O08983 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps1O08983 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hps1O08983 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps1O08983 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps1O08983 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps1O08983 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps1O08983 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps1O08983 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps1O08983 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps1O08983 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hps1O08983 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps1O08983 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps1O08983 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps1O08983 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hps1O08983 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.67■□□□□ 0.58
Hps1O08983 Gm10232-201ENSMUST00000089221 720 ntBASIC18.67■□□□□ 0.58
Hps1O08983 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps1O08983 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hps1O08983 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps1O08983 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Hps1O08983 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps1O08983 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps1O08983 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps1O08983 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps1O08983 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Hps1O08983 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps1O08983 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.66■□□□□ 0.58
Hps1O08983 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.66■□□□□ 0.58
Hps1O08983 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps1O08983 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps1O08983 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Hps1O08983 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hps1O08983 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps1O08983 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps1O08983 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hps1O08983 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps1O08983 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hps1O08983 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps1O08983 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hps1O08983 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
Hps1O08983 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms