Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa8J3QNX5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa8J3QNX5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.63■□□□□ 0.57
Shisa8J3QNX5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.63■□□□□ 0.57
Shisa8J3QNX5 Gm27502-201ENSMUST00000183495 199 ntBASIC18.63■□□□□ 0.57
Shisa8J3QNX5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Shisa8J3QNX5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa8J3QNX5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa8J3QNX5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Shisa8J3QNX5 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa8J3QNX5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa8J3QNX5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.63■□□□□ 0.57
Shisa8J3QNX5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa8J3QNX5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa8J3QNX5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Shisa8J3QNX5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa8J3QNX5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Shisa8J3QNX5 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa8J3QNX5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa8J3QNX5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.62■□□□□ 0.57
Shisa8J3QNX5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa8J3QNX5 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.62■□□□□ 0.57
Shisa8J3QNX5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shisa8J3QNX5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shisa8J3QNX5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shisa8J3QNX5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shisa8J3QNX5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shisa8J3QNX5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shisa8J3QNX5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shisa8J3QNX5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Shisa8J3QNX5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Shisa8J3QNX5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Shisa8J3QNX5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Shisa8J3QNX5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shisa8J3QNX5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Shisa8J3QNX5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shisa8J3QNX5 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shisa8J3QNX5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shisa8J3QNX5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shisa8J3QNX5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Shisa8J3QNX5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.59■□□□□ 0.57
Shisa8J3QNX5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shisa8J3QNX5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shisa8J3QNX5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Shisa8J3QNX5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shisa8J3QNX5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Shisa8J3QNX5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Shisa8J3QNX5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shisa8J3QNX5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shisa8J3QNX5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shisa8J3QNX5 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.58■□□□□ 0.57
Shisa8J3QNX5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Shisa8J3QNX5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shisa8J3QNX5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Shisa8J3QNX5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shisa8J3QNX5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shisa8J3QNX5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shisa8J3QNX5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.57■□□□□ 0.56
Shisa8J3QNX5 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Shisa8J3QNX5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shisa8J3QNX5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shisa8J3QNX5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Shisa8J3QNX5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shisa8J3QNX5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shisa8J3QNX5 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shisa8J3QNX5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shisa8J3QNX5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.56■□□□□ 0.56
Shisa8J3QNX5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shisa8J3QNX5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.56■□□□□ 0.56
Shisa8J3QNX5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Shisa8J3QNX5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shisa8J3QNX5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Shisa8J3QNX5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shisa8J3QNX5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shisa8J3QNX5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.55■□□□□ 0.56
Shisa8J3QNX5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Shisa8J3QNX5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shisa8J3QNX5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shisa8J3QNX5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shisa8J3QNX5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Shisa8J3QNX5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.54■□□□□ 0.56
Shisa8J3QNX5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Shisa8J3QNX5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shisa8J3QNX5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shisa8J3QNX5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shisa8J3QNX5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.53■□□□□ 0.56
Shisa8J3QNX5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shisa8J3QNX5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shisa8J3QNX5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shisa8J3QNX5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.53■□□□□ 0.56
Shisa8J3QNX5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shisa8J3QNX5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Shisa8J3QNX5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shisa8J3QNX5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.53■□□□□ 0.56
Shisa8J3QNX5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shisa8J3QNX5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shisa8J3QNX5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.52■□□□□ 0.56
Shisa8J3QNX5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Shisa8J3QNX5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shisa8J3QNX5 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms