Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ube4aE9Q735 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC24.86■■□□□ 1.57
Ube4aE9Q735 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ube4aE9Q735 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ube4aE9Q735 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ube4aE9Q735 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ube4aE9Q735 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ube4aE9Q735 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ube4aE9Q735 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ube4aE9Q735 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ube4aE9Q735 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ube4aE9Q735 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ube4aE9Q735 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC24.85■■□□□ 1.57
Ube4aE9Q735 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ube4aE9Q735 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Ube4aE9Q735 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ube4aE9Q735 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ube4aE9Q735 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ube4aE9Q735 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC24.85■■□□□ 1.57
Ube4aE9Q735 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ube4aE9Q735 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.84■■□□□ 1.57
Ube4aE9Q735 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC24.84■■□□□ 1.57
Ube4aE9Q735 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC24.84■■□□□ 1.57
Ube4aE9Q735 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Ube4aE9Q735 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ube4aE9Q735 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC24.83■■□□□ 1.57
Ube4aE9Q735 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ube4aE9Q735 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ube4aE9Q735 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ube4aE9Q735 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Ube4aE9Q735 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ube4aE9Q735 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ube4aE9Q735 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC24.82■■□□□ 1.56
Ube4aE9Q735 Gm44949-201ENSMUST00000206423 1450 ntBASIC24.82■■□□□ 1.56
Ube4aE9Q735 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
Ube4aE9Q735 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Ube4aE9Q735 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC24.81■■□□□ 1.56
Ube4aE9Q735 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ube4aE9Q735 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ube4aE9Q735 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ube4aE9Q735 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ube4aE9Q735 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ube4aE9Q735 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ube4aE9Q735 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ube4aE9Q735 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ube4aE9Q735 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC24.8■■□□□ 1.56
Ube4aE9Q735 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC24.8■■□□□ 1.56
Ube4aE9Q735 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC24.8■■□□□ 1.56
Ube4aE9Q735 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.8■■□□□ 1.56
Ube4aE9Q735 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ube4aE9Q735 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ube4aE9Q735 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.56
Ube4aE9Q735 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Ube4aE9Q735 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Ube4aE9Q735 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ube4aE9Q735 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ube4aE9Q735 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Ube4aE9Q735 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC24.78■■□□□ 1.56
Ube4aE9Q735 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ube4aE9Q735 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Ube4aE9Q735 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC24.78■■□□□ 1.56
Ube4aE9Q735 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ube4aE9Q735 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.78■■□□□ 1.56
Ube4aE9Q735 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ube4aE9Q735 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ube4aE9Q735 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ube4aE9Q735 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ube4aE9Q735 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ube4aE9Q735 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ube4aE9Q735 Cdc34b-202ENSMUST00000188741 1252 ntBASIC24.76■■□□□ 1.55
Ube4aE9Q735 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ube4aE9Q735 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Ube4aE9Q735 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ube4aE9Q735 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ube4aE9Q735 Gm10209-201ENSMUST00000203397 1607 ntBASIC24.75■■□□□ 1.55
Ube4aE9Q735 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ube4aE9Q735 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ube4aE9Q735 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Ube4aE9Q735 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ube4aE9Q735 Gm26833-201ENSMUST00000180899 440 ntBASIC24.75■■□□□ 1.55
Ube4aE9Q735 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ube4aE9Q735 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ube4aE9Q735 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ube4aE9Q735 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ube4aE9Q735 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC24.74■■□□□ 1.55
Ube4aE9Q735 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Ube4aE9Q735 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC24.74■■□□□ 1.55
Ube4aE9Q735 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ube4aE9Q735 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ube4aE9Q735 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ube4aE9Q735 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Ube4aE9Q735 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ube4aE9Q735 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ube4aE9Q735 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ube4aE9Q735 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Ube4aE9Q735 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ube4aE9Q735 Gm27045-201ENSMUST00000182145 1402 ntBASIC24.72■■□□□ 1.55
Ube4aE9Q735 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ube4aE9Q735 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ube4aE9Q735 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms