Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
Hfm1D3Z4R1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC29.36■■■□□ 2.29
Hfm1D3Z4R1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Hfm1D3Z4R1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
Hfm1D3Z4R1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
Hfm1D3Z4R1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
Hfm1D3Z4R1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Hfm1D3Z4R1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
Hfm1D3Z4R1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Hfm1D3Z4R1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC29.35■■■□□ 2.29
Hfm1D3Z4R1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Hfm1D3Z4R1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC29.35■■■□□ 2.29
Hfm1D3Z4R1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Hfm1D3Z4R1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Hfm1D3Z4R1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Hfm1D3Z4R1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
Hfm1D3Z4R1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC29.34■■■□□ 2.29
Hfm1D3Z4R1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Hfm1D3Z4R1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Hfm1D3Z4R1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
Hfm1D3Z4R1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Hfm1D3Z4R1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Hfm1D3Z4R1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Hfm1D3Z4R1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
Hfm1D3Z4R1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Hfm1D3Z4R1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Hfm1D3Z4R1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Hfm1D3Z4R1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Hfm1D3Z4R1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC29.32■■■□□ 2.28
Hfm1D3Z4R1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Hfm1D3Z4R1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Hfm1D3Z4R1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Hfm1D3Z4R1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Hfm1D3Z4R1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Hfm1D3Z4R1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Hfm1D3Z4R1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
Hfm1D3Z4R1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Hfm1D3Z4R1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Hfm1D3Z4R1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Hfm1D3Z4R1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC29.31■■■□□ 2.28
Hfm1D3Z4R1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC29.3■■■□□ 2.28
Hfm1D3Z4R1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Hfm1D3Z4R1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Hfm1D3Z4R1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
Hfm1D3Z4R1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Hfm1D3Z4R1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Hfm1D3Z4R1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Hfm1D3Z4R1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC29.3■■■□□ 2.28
Hfm1D3Z4R1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Hfm1D3Z4R1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Hfm1D3Z4R1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Hfm1D3Z4R1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Hfm1D3Z4R1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC29.29■■■□□ 2.28
Hfm1D3Z4R1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC29.29■■■□□ 2.28
Hfm1D3Z4R1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC29.29■■■□□ 2.28
Hfm1D3Z4R1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Hfm1D3Z4R1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Hfm1D3Z4R1 Gm27045-201ENSMUST00000182145 1402 ntBASIC29.29■■■□□ 2.28
Hfm1D3Z4R1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
Hfm1D3Z4R1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Hfm1D3Z4R1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Hfm1D3Z4R1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Hfm1D3Z4R1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Hfm1D3Z4R1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Hfm1D3Z4R1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Hfm1D3Z4R1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Hfm1D3Z4R1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Hfm1D3Z4R1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Hfm1D3Z4R1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
Hfm1D3Z4R1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Hfm1D3Z4R1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC29.27■■■□□ 2.28
Hfm1D3Z4R1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC29.26■■■□□ 2.28
Hfm1D3Z4R1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
Hfm1D3Z4R1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
Hfm1D3Z4R1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Hfm1D3Z4R1 Gm11421-201ENSMUST00000122124 294 ntBASIC29.26■■■□□ 2.27
Hfm1D3Z4R1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Hfm1D3Z4R1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Hfm1D3Z4R1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC29.25■■■□□ 2.27
Hfm1D3Z4R1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC29.25■■■□□ 2.27
Hfm1D3Z4R1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
Hfm1D3Z4R1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Hfm1D3Z4R1 Gm12933-201ENSMUST00000120203 872 ntBASIC29.24■■■□□ 2.27
Hfm1D3Z4R1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC29.24■■■□□ 2.27
Hfm1D3Z4R1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
Hfm1D3Z4R1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Hfm1D3Z4R1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
Hfm1D3Z4R1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Hfm1D3Z4R1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Hfm1D3Z4R1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Hfm1D3Z4R1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
Hfm1D3Z4R1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Hfm1D3Z4R1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Hfm1D3Z4R1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC29.22■■■□□ 2.27
Hfm1D3Z4R1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC29.22■■■□□ 2.27
Hfm1D3Z4R1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC29.22■■■□□ 2.27
Hfm1D3Z4R1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Hfm1D3Z4R1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
Hfm1D3Z4R1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Hfm1D3Z4R1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms