Protein–RNA interactions for Protein: A6H5X4

Phf11, PHD finger protein 11, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11A6H5X4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Phf11A6H5X4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Phf11A6H5X4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Phf11A6H5X4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Phf11A6H5X4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Phf11A6H5X4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Phf11A6H5X4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Phf11A6H5X4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Phf11A6H5X4 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.23■□□□□ 0.83
Phf11A6H5X4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
Phf11A6H5X4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Phf11A6H5X4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.23■□□□□ 0.83
Phf11A6H5X4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Phf11A6H5X4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Phf11A6H5X4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Phf11A6H5X4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Phf11A6H5X4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Phf11A6H5X4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Phf11A6H5X4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Phf11A6H5X4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.22■□□□□ 0.83
Phf11A6H5X4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Phf11A6H5X4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Phf11A6H5X4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Phf11A6H5X4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phf11A6H5X4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phf11A6H5X4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phf11A6H5X4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phf11A6H5X4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phf11A6H5X4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phf11A6H5X4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Phf11A6H5X4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Phf11A6H5X4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Phf11A6H5X4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Phf11A6H5X4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Phf11A6H5X4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phf11A6H5X4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phf11A6H5X4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.2■□□□□ 0.82
Phf11A6H5X4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Phf11A6H5X4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Phf11A6H5X4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Phf11A6H5X4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phf11A6H5X4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phf11A6H5X4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phf11A6H5X4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.19■□□□□ 0.82
Phf11A6H5X4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.19■□□□□ 0.82
Phf11A6H5X4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phf11A6H5X4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Phf11A6H5X4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Phf11A6H5X4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Phf11A6H5X4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phf11A6H5X4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phf11A6H5X4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phf11A6H5X4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phf11A6H5X4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.18■□□□□ 0.82
Phf11A6H5X4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.18■□□□□ 0.82
Phf11A6H5X4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.18■□□□□ 0.82
Phf11A6H5X4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.18■□□□□ 0.82
Phf11A6H5X4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.18■□□□□ 0.82
Phf11A6H5X4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.18■□□□□ 0.82
Phf11A6H5X4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Phf11A6H5X4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Phf11A6H5X4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phf11A6H5X4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Phf11A6H5X4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phf11A6H5X4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phf11A6H5X4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phf11A6H5X4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.17■□□□□ 0.82
Phf11A6H5X4 Gm22238-201ENSMUST00000175222 88 ntBASIC20.17■□□□□ 0.82
Phf11A6H5X4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Phf11A6H5X4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phf11A6H5X4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Phf11A6H5X4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phf11A6H5X4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phf11A6H5X4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phf11A6H5X4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Phf11A6H5X4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phf11A6H5X4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phf11A6H5X4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Phf11A6H5X4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phf11A6H5X4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Phf11A6H5X4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phf11A6H5X4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Phf11A6H5X4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Phf11A6H5X4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Phf11A6H5X4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.15■□□□□ 0.82
Phf11A6H5X4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Phf11A6H5X4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Phf11A6H5X4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Phf11A6H5X4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Phf11A6H5X4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Phf11A6H5X4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Phf11A6H5X4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Phf11A6H5X4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Phf11A6H5X4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Phf11A6H5X4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Phf11A6H5X4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Phf11A6H5X4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Phf11A6H5X4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Phf11A6H5X4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Phf11A6H5X4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms