Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smim17A0A504 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Smim17A0A504 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smim17A0A504 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smim17A0A504 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smim17A0A504 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smim17A0A504 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smim17A0A504 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smim17A0A504 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smim17A0A504 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Smim17A0A504 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smim17A0A504 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.48■□□□□ 0.55
Smim17A0A504 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smim17A0A504 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smim17A0A504 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Smim17A0A504 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smim17A0A504 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smim17A0A504 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smim17A0A504 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smim17A0A504 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smim17A0A504 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smim17A0A504 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smim17A0A504 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smim17A0A504 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Smim17A0A504 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smim17A0A504 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Smim17A0A504 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smim17A0A504 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.46■□□□□ 0.55
Smim17A0A504 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smim17A0A504 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smim17A0A504 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.46■□□□□ 0.55
Smim17A0A504 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smim17A0A504 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.46■□□□□ 0.55
Smim17A0A504 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smim17A0A504 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Smim17A0A504 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smim17A0A504 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smim17A0A504 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smim17A0A504 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Smim17A0A504 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Smim17A0A504 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smim17A0A504 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smim17A0A504 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smim17A0A504 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smim17A0A504 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Smim17A0A504 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smim17A0A504 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smim17A0A504 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smim17A0A504 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smim17A0A504 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Smim17A0A504 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smim17A0A504 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smim17A0A504 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smim17A0A504 Gm9812-201ENSMUST00000061934 968 ntBASIC18.44■□□□□ 0.54
Smim17A0A504 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smim17A0A504 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smim17A0A504 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smim17A0A504 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Smim17A0A504 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smim17A0A504 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smim17A0A504 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Smim17A0A504 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smim17A0A504 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smim17A0A504 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smim17A0A504 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smim17A0A504 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.43■□□□□ 0.54
Smim17A0A504 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smim17A0A504 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smim17A0A504 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smim17A0A504 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.42■□□□□ 0.54
Smim17A0A504 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.42■□□□□ 0.54
Smim17A0A504 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smim17A0A504 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smim17A0A504 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smim17A0A504 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smim17A0A504 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Smim17A0A504 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smim17A0A504 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smim17A0A504 Gm6821-201ENSMUST00000107540 542 ntBASIC18.41■□□□□ 0.54
Smim17A0A504 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smim17A0A504 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smim17A0A504 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
Smim17A0A504 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smim17A0A504 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smim17A0A504 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smim17A0A504 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smim17A0A504 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smim17A0A504 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smim17A0A504 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smim17A0A504 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.4■□□□□ 0.54
Smim17A0A504 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smim17A0A504 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smim17A0A504 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Smim17A0A504 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim17A0A504 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim17A0A504 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smim17A0A504 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim17A0A504 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim17A0A504 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smim17A0A504 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms