Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.97■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.96■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.96■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.96■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15d-2-dv6d-2A0A0G2JGQ7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.95■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.94■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.94■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.94■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.93■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.93■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13238-201ENSMUST00000117655 780 ntBASIC17.92■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.92■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43566-201ENSMUST00000196851 808 ntBASIC17.91■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.91■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.9■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.9■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.9■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav15d-2-dv6d-2A0A0G2JGQ7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.89■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms