Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7-5A0A0G2JFX6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7-5A0A0G2JFX6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7-5A0A0G2JFX6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7-5A0A0G2JFX6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7-5A0A0G2JFX6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7-5A0A0G2JFX6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7-5A0A0G2JFX6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7-5A0A0G2JFX6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav7-5A0A0G2JFX6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav7-5A0A0G2JFX6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav7-5A0A0G2JFX6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trav7-5A0A0G2JFX6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav7-5A0A0G2JFX6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav7-5A0A0G2JFX6 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.02■□□□□ 0.15
Trav7-5A0A0G2JFX6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav7-5A0A0G2JFX6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav7-5A0A0G2JFX6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7-5A0A0G2JFX6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7-5A0A0G2JFX6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7-5A0A0G2JFX6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7-5A0A0G2JFX6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
Trav7-5A0A0G2JFX6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav7-5A0A0G2JFX6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.01■□□□□ 0.15
Trav7-5A0A0G2JFX6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7-5A0A0G2JFX6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7-5A0A0G2JFX6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav7-5A0A0G2JFX6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7-5A0A0G2JFX6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7-5A0A0G2JFX6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7-5A0A0G2JFX6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7-5A0A0G2JFX6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7-5A0A0G2JFX6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7-5A0A0G2JFX6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Trav7-5A0A0G2JFX6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7-5A0A0G2JFX6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7-5A0A0G2JFX6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Trav7-5A0A0G2JFX6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Trav7-5A0A0G2JFX6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7-5A0A0G2JFX6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7-5A0A0G2JFX6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7-5A0A0G2JFX6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav7-5A0A0G2JFX6 Gm22238-201ENSMUST00000175222 88 ntBASIC15.99■□□□□ 0.15
Trav7-5A0A0G2JFX6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.99■□□□□ 0.15
Trav7-5A0A0G2JFX6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav7-5A0A0G2JFX6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7-5A0A0G2JFX6 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.99■□□□□ 0.15
Trav7-5A0A0G2JFX6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7-5A0A0G2JFX6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7-5A0A0G2JFX6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav7-5A0A0G2JFX6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7-5A0A0G2JFX6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7-5A0A0G2JFX6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav7-5A0A0G2JFX6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7-5A0A0G2JFX6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.98■□□□□ 0.15
Trav7-5A0A0G2JFX6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7-5A0A0G2JFX6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-5A0A0G2JFX6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-5A0A0G2JFX6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-5A0A0G2JFX6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
Trav7-5A0A0G2JFX6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Trav7-5A0A0G2JFX6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-5A0A0G2JFX6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav7-5A0A0G2JFX6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.97■□□□□ 0.15
Trav7-5A0A0G2JFX6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-5A0A0G2JFX6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-5A0A0G2JFX6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav7-5A0A0G2JFX6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-5A0A0G2JFX6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-5A0A0G2JFX6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7-5A0A0G2JFX6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trav7-5A0A0G2JFX6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav7-5A0A0G2JFX6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7-5A0A0G2JFX6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.96■□□□□ 0.15
Trav7-5A0A0G2JFX6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trav7-5A0A0G2JFX6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trav7-5A0A0G2JFX6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7-5A0A0G2JFX6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7-5A0A0G2JFX6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7-5A0A0G2JFX6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7-5A0A0G2JFX6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7-5A0A0G2JFX6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav7-5A0A0G2JFX6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.96■□□□□ 0.14
Trav7-5A0A0G2JFX6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav7-5A0A0G2JFX6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav7-5A0A0G2JFX6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7-5A0A0G2JFX6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7-5A0A0G2JFX6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7-5A0A0G2JFX6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7-5A0A0G2JFX6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
Trav7-5A0A0G2JFX6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7-5A0A0G2JFX6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7-5A0A0G2JFX6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7-5A0A0G2JFX6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav7-5A0A0G2JFX6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav7-5A0A0G2JFX6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7-5A0A0G2JFX6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7-5A0A0G2JFX6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7-5A0A0G2JFX6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav7-5A0A0G2JFX6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms