Protein–RNA interactions for Protein: A0A075B6B1

Trav14d-1, T cell receptor alpha variable 14D-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14d-1A0A075B6B1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14d-1A0A075B6B1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14d-1A0A075B6B1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14d-1A0A075B6B1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14d-1A0A075B6B1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14d-1A0A075B6B1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14d-1A0A075B6B1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14d-1A0A075B6B1 Gm8503-201ENSMUST00000118131 455 ntBASIC15.22■□□□□ 0.03
Trav14d-1A0A075B6B1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav14d-1A0A075B6B1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14d-1A0A075B6B1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14d-1A0A075B6B1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav14d-1A0A075B6B1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.21■□□□□ 0.03
Trav14d-1A0A075B6B1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav14d-1A0A075B6B1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav14d-1A0A075B6B1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav14d-1A0A075B6B1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav14d-1A0A075B6B1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav14d-1A0A075B6B1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav14d-1A0A075B6B1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav14d-1A0A075B6B1 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.21■□□□□ 0.03
Trav14d-1A0A075B6B1 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.21■□□□□ 0.03
Trav14d-1A0A075B6B1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Trav14d-1A0A075B6B1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav14d-1A0A075B6B1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav14d-1A0A075B6B1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14d-1A0A075B6B1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trav14d-1A0A075B6B1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14d-1A0A075B6B1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14d-1A0A075B6B1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.2■□□□□ 0.02
Trav14d-1A0A075B6B1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14d-1A0A075B6B1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav14d-1A0A075B6B1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav14d-1A0A075B6B1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav14d-1A0A075B6B1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14d-1A0A075B6B1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav14d-1A0A075B6B1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14d-1A0A075B6B1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14d-1A0A075B6B1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14d-1A0A075B6B1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav14d-1A0A075B6B1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14d-1A0A075B6B1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14d-1A0A075B6B1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14d-1A0A075B6B1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav14d-1A0A075B6B1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14d-1A0A075B6B1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14d-1A0A075B6B1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14d-1A0A075B6B1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14d-1A0A075B6B1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav14d-1A0A075B6B1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav14d-1A0A075B6B1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav14d-1A0A075B6B1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav14d-1A0A075B6B1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav14d-1A0A075B6B1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav14d-1A0A075B6B1 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.18■□□□□ 0.02
Trav14d-1A0A075B6B1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav14d-1A0A075B6B1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav14d-1A0A075B6B1 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.17■□□□□ 0.02
Trav14d-1A0A075B6B1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav14d-1A0A075B6B1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav14d-1A0A075B6B1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav14d-1A0A075B6B1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav14d-1A0A075B6B1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav14d-1A0A075B6B1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav14d-1A0A075B6B1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav14d-1A0A075B6B1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav14d-1A0A075B6B1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14d-1A0A075B6B1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14d-1A0A075B6B1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14d-1A0A075B6B1 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.16■□□□□ 0.02
Trav14d-1A0A075B6B1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14d-1A0A075B6B1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14d-1A0A075B6B1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14d-1A0A075B6B1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14d-1A0A075B6B1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14d-1A0A075B6B1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14d-1A0A075B6B1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14d-1A0A075B6B1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.16■□□□□ 0.02
Trav14d-1A0A075B6B1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14d-1A0A075B6B1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14d-1A0A075B6B1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14d-1A0A075B6B1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav14d-1A0A075B6B1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.16■□□□□ 0.02
Trav14d-1A0A075B6B1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav14d-1A0A075B6B1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav14d-1A0A075B6B1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav14d-1A0A075B6B1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav14d-1A0A075B6B1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav14d-1A0A075B6B1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.15■□□□□ 0.02
Trav14d-1A0A075B6B1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav14d-1A0A075B6B1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.15■□□□□ 0.02
Trav14d-1A0A075B6B1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav14d-1A0A075B6B1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav14d-1A0A075B6B1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav14d-1A0A075B6B1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav14d-1A0A075B6B1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav14d-1A0A075B6B1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav14d-1A0A075B6B1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav14d-1A0A075B6B1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav14d-1A0A075B6B1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms