Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6d-7A0A075B6B0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6d-7A0A075B6B0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-7A0A075B6B0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-7A0A075B6B0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-7A0A075B6B0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-7A0A075B6B0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-7A0A075B6B0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-7A0A075B6B0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav6d-7A0A075B6B0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-7A0A075B6B0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-7A0A075B6B0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav6d-7A0A075B6B0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-7A0A075B6B0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-7A0A075B6B0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-7A0A075B6B0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav6d-7A0A075B6B0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-7A0A075B6B0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-7A0A075B6B0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6d-7A0A075B6B0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav6d-7A0A075B6B0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-7A0A075B6B0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.69■□□□□ 0.1
Trav6d-7A0A075B6B0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-7A0A075B6B0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-7A0A075B6B0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-7A0A075B6B0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-7A0A075B6B0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-7A0A075B6B0 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.69■□□□□ 0.1
Trav6d-7A0A075B6B0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6d-7A0A075B6B0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-7A0A075B6B0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav6d-7A0A075B6B0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-7A0A075B6B0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-7A0A075B6B0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-7A0A075B6B0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-7A0A075B6B0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-7A0A075B6B0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-7A0A075B6B0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-7A0A075B6B0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-7A0A075B6B0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-7A0A075B6B0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6d-7A0A075B6B0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav6d-7A0A075B6B0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-7A0A075B6B0 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.67■□□□□ 0.1
Trav6d-7A0A075B6B0 Gm45102-201ENSMUST00000207427 857 ntBASIC15.67■□□□□ 0.1
Trav6d-7A0A075B6B0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.67■□□□□ 0.1
Trav6d-7A0A075B6B0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-7A0A075B6B0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-7A0A075B6B0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-7A0A075B6B0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-7A0A075B6B0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav6d-7A0A075B6B0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-7A0A075B6B0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav6d-7A0A075B6B0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6d-7A0A075B6B0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-7A0A075B6B0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-7A0A075B6B0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-7A0A075B6B0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-7A0A075B6B0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-7A0A075B6B0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-7A0A075B6B0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-7A0A075B6B0 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.66■□□□□ 0.1
Trav6d-7A0A075B6B0 Gm14117-201ENSMUST00000122417 843 ntBASIC15.66■□□□□ 0.1
Trav6d-7A0A075B6B0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-7A0A075B6B0 Etf1-202ENSMUST00000180351 108 ntBASIC15.66■□□□□ 0.1
Trav6d-7A0A075B6B0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.66■□□□□ 0.1
Trav6d-7A0A075B6B0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-7A0A075B6B0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-7A0A075B6B0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-7A0A075B6B0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-7A0A075B6B0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6d-7A0A075B6B0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav6d-7A0A075B6B0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-7A0A075B6B0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-7A0A075B6B0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.65■□□□□ 0.1
Trav6d-7A0A075B6B0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav6d-7A0A075B6B0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-7A0A075B6B0 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.65■□□□□ 0.1
Trav6d-7A0A075B6B0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav6d-7A0A075B6B0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms