Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh17Q9R100 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh17Q9R100 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Cdh17Q9R100 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh17Q9R100 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cdh17Q9R100 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh17Q9R100 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cdh17Q9R100 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh17Q9R100 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Cdh17Q9R100 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.08■□□□□ 0.81
Cdh17Q9R100 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh17Q9R100 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh17Q9R100 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh17Q9R100 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh17Q9R100 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh17Q9R100 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh17Q9R100 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh17Q9R100 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh17Q9R100 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
Cdh17Q9R100 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh17Q9R100 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.07■□□□□ 0.8
Cdh17Q9R100 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh17Q9R100 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh17Q9R100 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh17Q9R100 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh17Q9R100 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh17Q9R100 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cdh17Q9R100 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.06■□□□□ 0.8
Cdh17Q9R100 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh17Q9R100 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh17Q9R100 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cdh17Q9R100 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdh17Q9R100 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh17Q9R100 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh17Q9R100 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh17Q9R100 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh17Q9R100 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cdh17Q9R100 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh17Q9R100 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh17Q9R100 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cdh17Q9R100 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdh17Q9R100 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh17Q9R100 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh17Q9R100 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh17Q9R100 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh17Q9R100 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh17Q9R100 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.03■□□□□ 0.8
Cdh17Q9R100 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh17Q9R100 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdh17Q9R100 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.02■□□□□ 0.8
Cdh17Q9R100 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh17Q9R100 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Cdh17Q9R100 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh17Q9R100 Gm13238-201ENSMUST00000117655 780 ntBASIC20.02■□□□□ 0.8
Cdh17Q9R100 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.02■□□□□ 0.8
Cdh17Q9R100 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Cdh17Q9R100 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdh17Q9R100 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cdh17Q9R100 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Cdh17Q9R100 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh17Q9R100 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh17Q9R100 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh17Q9R100 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.01■□□□□ 0.79
Cdh17Q9R100 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.01■□□□□ 0.79
Cdh17Q9R100 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh17Q9R100 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh17Q9R100 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh17Q9R100 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20■□□□□ 0.79
Cdh17Q9R100 Gm43566-201ENSMUST00000196851 808 ntBASIC20■□□□□ 0.79
Cdh17Q9R100 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh17Q9R100 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh17Q9R100 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh17Q9R100 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh17Q9R100 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh17Q9R100 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh17Q9R100 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh17Q9R100 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cdh17Q9R100 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdh17Q9R100 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdh17Q9R100 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdh17Q9R100 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.99■□□□□ 0.79
Cdh17Q9R100 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms